Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DRB4X5D2U9 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DRB4X5D2U9 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC4.54□□□□□ -1.68
HLA-DRB4X5D2U9 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HLA-DRB4X5D2U9 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DRB4X5D2U9 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 EIF3EP1-201ENST00000433978 1316 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SKP69-201ENST00000365390 305 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 RNA5SP187-201ENST00000384400 119 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AL354707.3-201ENST00000427308 331 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC002553.3-201ENST00000453002 341 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 HMGN1P17-201ENST00000513734 295 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 RNA5SP434-201ENST00000516647 121 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC021269.1-201ENST00000526860 705 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC009852.2-201ENST00000567898 485 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 RN7SL371P-201ENST00000578099 267 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 RNU4ATAC-201ENST00000580972 127 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC005828.7-201ENST00000607331 556 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC073389.3-201ENST00000609434 935 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AL080312.2-201ENST00000613001 630 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 FAM27E2-201ENST00000619668 403 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AL357140.4-201ENST00000636827 412 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AC005005.4-201ENST00000623789 16698 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 PARP4P2-201ENST00000446672 3326 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HLA-DRB4X5D2U9 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.53□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
HLA-DRB4X5D2U9 AC005261.6-201ENST00000623072 1387 ntBASIC4.53□□□□□ -1.69
HLA-DRB4X5D2U9 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 SNORA21-201ENST00000362423 132 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RNU105B-201ENST00000364478 208 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RBBP4P5-201ENST00000398583 1266 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 YWHAZP6-201ENST00000399764 738 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RN7SKP86-201ENST00000410454 332 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RN7SKP166-201ENST00000410812 305 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RN7SKP108-201ENST00000411367 328 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL035422.1-201ENST00000414193 397 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RPL35AP31-201ENST00000418340 337 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RPS15AP30-201ENST00000420976 390 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 RPL12P12-201ENST00000424633 501 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AL136231.1-201ENST00000429407 730 ntBASIC4.52□□□□□ -1.69
HLA-DRB4X5D2U9 AC108479.1-201ENST00000431142 427 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms