Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 AMZ2-210ENST00000580753 1339 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 AC112719.2-201ENST00000501239 1685 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC7.73□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF101P1-201ENST00000435701 1720 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC020549.1-201ENST00000536916 1440 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 NF1P2-201ENST00000556855 2505 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 RN7SKP257-201ENST00000364525 309 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 Y_RNA.573-201ENST00000384763 105 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 NHP2P2-201ENST00000396362 460 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AF228730.4-201ENST00000421457 183 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 LINC00851-201ENST00000423033 727 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 ZYG11AP1-201ENST00000430329 837 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL353754.1-201ENST00000440219 340 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC002553.1-201ENST00000442828 802 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 EIPR1-IT1-201ENST00000454977 718 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC007547.2-201ENST00000468802 360 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 RN7SL12P-201ENST00000473849 290 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 RPL7AP26-201ENST00000488538 813 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC116353.1-201ENST00000489727 316 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC090835.1-201ENST00000515189 1024 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 SLN-202ENST00000525934 436 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC012146.2-201ENST00000576545 416 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 KCTD2-206ENST00000581589 993 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC060780.3-201ENST00000589464 80 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 U1.22-201ENST00000605806 164 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 RN7SL840P-201ENST00000606883 284 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC000068.3-201ENST00000607934 427 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 OR8G7P-201ENST00000616658 848 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC239600.2-201ENST00000619615 1165 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AP000648.2-201ENST00000624182 404 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 DLST-216ENST00000626051 252 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CLUHP10-201ENST00000631979 980 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL139254.2-202ENST00000641937 1156 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC103760.1-201ENST00000521326 1486 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AL080317.3-201ENST00000607434 4315 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 APBB2-224ENST00000513140 4166 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AC006210.2-201ENST00000367074 1545 ntBASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF878-201ENST00000547628 1734 ntAPPRIS P1 TSL 3 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 AOAH-208ENST00000612871 2336 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
PCDHB11Q9Y5F2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 ZNF430-203ENST00000595401 3021 ntTSL 2 BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 KLHL32-202ENST00000369261 3698 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.71□□□□□ -1.17
PCDHB11Q9Y5F2 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ASAH1-203ENST00000381733 2512 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.71□□□□□ -1.18
PCDHB11Q9Y5F2 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms