Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 AC090337.1-201ENST00000579651 2074 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 WDR76-201ENST00000263795 3978 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GDI2P1-201ENST00000429312 1336 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 CEACAM7-201ENST00000006724 2489 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 OFD1P10Y-201ENST00000434110 1433 ntBASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 RNF214-206ENST00000531452 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 NSD1-216ENST00000638627 1866 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 HK1-203ENST00000360289 3961 ntTSL 5 BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
VPS9D1Q9Y2B5 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 IL18R1-201ENST00000233957 3661 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 FBXO36-201ENST00000283946 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PPP2R2B-211ENST00000508545 2042 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 OR4A15-201ENST00000314706 1035 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RNA5SP145-201ENST00000363124 125 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.158-201ENST00000363651 101 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 SET-203ENST00000372688 801 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RNU1-39P-201ENST00000383897 165 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.556-201ENST00000384677 113 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 KRTAP9-1-201ENST00000398470 753 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SKP127-201ENST00000410443 354 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 Y_RNA.608-201ENST00000410647 95 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LINC00853-201ENST00000429328 661 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RPL31P35-201ENST00000431058 377 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 HIGD1AP8-201ENST00000453927 274 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PPP1R2P5-201ENST00000457256 603 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RNU6-261P-201ENST00000459506 102 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RPS27AP17-201ENST00000463344 455 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RPSAP39-201ENST00000467439 883 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC107398.1-201ENST00000486904 505 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RPS3P7-201ENST00000488662 726 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RNU6-764P-201ENST00000516396 105 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RNU2-46P-201ENST00000517038 113 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 TPM3P3-201ENST00000521343 354 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PTK2-241ENST00000522950 548 ntTSL 4 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LINC02321-201ENST00000555975 384 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ULK4P3-202ENST00000565158 593 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RBM22P12-201ENST00000567098 1255 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PRR13P4-201ENST00000577786 421 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 MIR3680-2-201ENST00000578247 87 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 MIR3680-1-201ENST00000581433 87 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 MIR5008-201ENST00000584300 94 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 RN7SL246P-201ENST00000584467 296 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC087393.3-201ENST00000584971 166 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC060766.2-201ENST00000588235 334 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC022149.1-201ENST00000596032 609 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC026150.3-201ENST00000602595 499 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AL953862.2-201ENST00000603089 820 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC087763.1-201ENST00000603391 286 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AL122127.1-201ENST00000603832 327 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC115286.1-201ENST00000604298 434 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC021646.1-201ENST00000605469 484 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC103710.4-201ENST00000609301 899 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 AC244517.12-201ENST00000623581 663 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ADD3-AS1-203ENST00000625954 472 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 HMGB4-203ENST00000519684 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 OR51E1-202ENST00000530215 2942 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 SEC63P2-201ENST00000503863 1939 ntBASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
VPS9D1Q9Y2B5 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms