Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 RNA5SP339-201ENST00000390987 122 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 RN7SKP151-201ENST00000410230 316 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 HCG18-243ENST00000602498 327 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ETV1-210ENST00000430479 6740 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 SNORA70H-201ENST00000383910 135 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 SNORA70J-201ENST00000384182 135 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 IGHVIII-76-1-201ENST00000523776 286 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 AC000068.2-201ENST00000608816 460 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC7.38□□□□□ -1.23
SCN11AQ9UI33 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SCN11AQ9UI33 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 CD86-204ENST00000469710 1604 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 GAPDHP24-201ENST00000328713 983 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 MIR1286-201ENST00000408112 78 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AC005532.2-201ENST00000467154 373 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 RN7SL184P-201ENST00000488308 297 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 RPS23P1-201ENST00000491662 432 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 OFD1P17-201ENST00000437639 3018 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AL034549.2-201ENST00000618285 3373 ntBASIC7.37□□□□□ -1.23
SCN11AQ9UI33 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SCN11AQ9UI33 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 RN7SKP115-201ENST00000363177 317 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 RNU4-34P-201ENST00000410431 124 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC005033.1-201ENST00000428904 813 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 RN7SL172P-201ENST00000460535 303 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 CSNK1A1P3-201ENST00000504105 330 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 IGLV3-24-201ENST00000517477 197 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 AC092944.2-201ENST00000605443 889 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 C4BPAP1-201ENST00000415474 1893 ntBASIC7.36□□□□□ -1.23
SCN11AQ9UI33 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
SCN11AQ9UI33 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms