Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 AC090236.2-201ENST00000587933 1101 ntBASIC6.08□□□□□ -1.44
SPASTQ9UBP0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 AL591167.1-201ENST00000607321 456 ntBASIC6.08□□□□□ -1.44
SPASTQ9UBP0 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 MIPEPP2-201ENST00000422560 1819 ntBASIC6.08□□□□□ -1.44
SPASTQ9UBP0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 ZNF101P1-201ENST00000435701 1720 ntBASIC6.08□□□□□ -1.44
SPASTQ9UBP0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 AC008627.1-201ENST00000517511 1704 ntBASIC6.08□□□□□ -1.44
SPASTQ9UBP0 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPASTQ9UBP0 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC020656.2-201ENST00000613291 5309 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 SAMMSON-210ENST00000641260 1308 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 OR7E25P-201ENST00000344844 931 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC009237.1-201ENST00000442127 744 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 HLA-DPA3-207ENST00000454398 229 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC018638.3-201ENST00000461273 132 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC104109.1-201ENST00000498563 436 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC006499.4-201ENST00000510947 694 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 OR5H7P-201ENST00000514084 930 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 RNA5SP271-201ENST00000516700 88 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 RN7SL753P-201ENST00000581238 290 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC008521.2-201ENST00000591021 259 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AL583832.1-201ENST00000603227 784 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC024589.2-201ENST00000605642 1294 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC073488.3-201ENST00000631611 778 ntBASIC6.07□□□□□ -1.44
SPASTQ9UBP0 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
SPASTQ9UBP0 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 BIN2P1-201ENST00000504996 1530 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 RN7SKP78-201ENST00000364711 318 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AL360271.1-201ENST00000395679 510 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC245096.1-201ENST00000413104 546 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 CBX1P3-201ENST00000413296 527 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 TRIM60P16-201ENST00000444048 694 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 OR13K1P-201ENST00000444577 975 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC092967.1-201ENST00000449016 481 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 CST12P-201ENST00000457644 362 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 RN7SL165P-201ENST00000477476 291 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC092865.4-201ENST00000477936 615 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 RNA5SP434-201ENST00000516647 121 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 IGKV3D-34-201ENST00000522638 302 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AP003080.1-202ENST00000526526 915 ntBASIC6.06□□□□□ -1.44
SPASTQ9UBP0 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.06□□□□□ -1.44
SPASTQ9UBP0 AL121579.2-201ENST00000555466 590 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms