Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RPS4XP23-201ENST00000487801 237 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AP003080.1-202ENST00000526526 915 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 OR9L1P-201ENST00000529493 933 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AP001804.2-201ENST00000533932 910 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AP005136.2-201ENST00000583253 1049 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC087575.1-201ENST00000585087 229 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC073046.2-201ENST00000604756 527 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AL138960.1-201ENST00000613838 513 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC126175.1-201ENST00000617041 758 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AL133370.2-201ENST00000619934 439 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 AC129778.1-202ENST00000623812 261 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AP002371.2-201ENST00000624450 503 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AL591379.1-207ENST00000635982 261 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 OR7E91P-202ENST00000642062 1198 ntBASIC8.66□□□□□ -1.02
USP35Q9P2H5 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
USP35Q9P2H5 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC8.66□□□□□ -1.02
USP35Q9P2H5 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC068446.1-201ENST00000556425 1549 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 EEF1A1P30-201ENST00000429708 1315 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 LCOR-201ENST00000286067 4542 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 RNA5SP110-201ENST00000362638 115 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 SNORD65-201ENST00000391079 73 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 MARK2P12-201ENST00000420129 585 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 GLUD1P9-201ENST00000420997 1173 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 GAPDHP48-201ENST00000436626 961 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 MRPS21P3-201ENST00000436696 262 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 OR2A1-AS1-202ENST00000467944 422 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 FABP5P6-201ENST00000510588 409 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC134349.2-201ENST00000535136 910 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
USP35Q9P2H5 MTND2P13-201ENST00000577438 1039 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 RN7SL404P-201ENST00000582421 281 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC073333.2-201ENST00000603589 769 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC005014.3-201ENST00000605985 190 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC026951.2-201ENST00000613847 241 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 RMST_5.1-201ENST00000618704 126 ntBASIC8.65□□□□□ -1.02
USP35Q9P2H5 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC8.65□□□□□ -1.02
USP35Q9P2H5 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USP35Q9P2H5 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.65□□□□□ -1.03
USP35Q9P2H5 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
USP35Q9P2H5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USP35Q9P2H5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
USP35Q9P2H5 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
USP35Q9P2H5 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
USP35Q9P2H5 OR11H13P-201ENST00000359695 979 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 OR2W4P-201ENST00000406496 926 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 RN7SKP281-201ENST00000410472 352 ntBASIC8.64□□□□□ -1.03
USP35Q9P2H5 AL359092.1-201ENST00000417156 265 ntBASIC8.64□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms