Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 Y_RNA.160-201ENST00000363677 92 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RNA5SP149-201ENST00000364952 92 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MXI1-204ENST00000369612 879 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RNU6-332P-201ENST00000391193 108 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 SRI-202ENST00000394641 653 ntTSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL034403.1-201ENST00000399414 885 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 DNAJC19P6-201ENST00000401853 280 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RN7SKP119-201ENST00000410753 273 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 YBX1P8-201ENST00000421881 943 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL355516.1-201ENST00000422082 746 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MTND1P28-201ENST00000435623 950 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RPS19P6-201ENST00000441327 433 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 COX6CP12-201ENST00000446748 202 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC019084.1-201ENST00000457337 432 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL122013.1-201ENST00000473054 801 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 UBTFL6-201ENST00000477929 1024 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC116353.1-201ENST00000489727 316 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RPL7P24-201ENST00000493052 752 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC107956.2-201ENST00000496042 454 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 OR10J9P-201ENST00000511932 987 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 LINC02365-203ENST00000522554 802 ntTSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MS4A12-205ENST00000537076 1019 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MIR4793-201ENST00000577502 87 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MIR3668-201ENST00000582138 75 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 BNIP3P26-201ENST00000600827 554 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AL512430.4-201ENST00000603085 613 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 U1.22-201ENST00000605806 164 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC007792.1-201ENST00000623023 402 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 LINC01778-208ENST00000635288 1095 ntTSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 AC099654.15-201ENST00000639802 509 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 SMG1P1-202ENST00000309865 4223 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 BX284613.1-201ENST00000452221 1641 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RTL3-201ENST00000321110 2648 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 NEPNP-201ENST00000404786 1371 ntBASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 TMEM116-201ENST00000355445 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
CUEDC1Q9NWM3 CHODL-203ENST00000400127 2239 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL136985.3-201ENST00000637377 2219 ntTSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 BRD8-203ENST00000402931 2982 ntTSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 ARPP21-207ENST00000417925 3086 ntTSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AC127502.2-201ENST00000602663 2351 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 MED23-209ENST00000539158 1636 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 IGLV3-12-201ENST00000390313 356 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL157698.1-201ENST00000415190 1011 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 PRUNEP1-201ENST00000425846 705 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 ZYG11AP1-201ENST00000430329 837 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 CELF2-AS2-202ENST00000432370 1227 ntTSL 5 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 MTND4LP10-201ENST00000435146 291 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AC019185.3-201ENST00000438805 323 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL136454.1-201ENST00000443181 466 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 GCNT1P5-201ENST00000449274 682 ntBASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.68□□□□□ -1.18
CUEDC1Q9NWM3 AC002075.1-201ENST00000457396 676 ntBASIC7.68□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms