Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 RNA5SP211-201ENST00000365516 117 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL354890.1-201ENST00000413730 346 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 MTND4LP17-201ENST00000414607 293 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 PRUNEP1-201ENST00000425846 705 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 USP24P1-201ENST00000433802 779 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC118758.1-202ENST00000454719 225 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC007386.1-201ENST00000455212 582 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC104164.1-201ENST00000460282 590 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 MTND3P6-201ENST00000485242 339 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC006512.2-201ENST00000543250 486 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 MIR4433B-201ENST00000581329 102 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AP001437.1-201ENST00000608783 456 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL590410.1-201ENST00000617925 333 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL033543.1-201ENST00000623440 13454 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 AC005224.3-201ENST00000584683 2140 ntBASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.68□□□□□ -1.34
BLOC1S4Q9NUP1 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RBPJP7-201ENST00000442803 1447 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RBPJP5-201ENST00000449433 1447 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AL161756.3-201ENST00000641216 2071 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 IMMTP1-201ENST00000435590 2219 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RNFT1P3-201ENST00000340898 1052 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 GNG5P2-201ENST00000372054 207 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 KIF4CP-201ENST00000422742 1279 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 BX679664.2-201ENST00000439282 283 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RPS7P3-201ENST00000443360 580 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RBBP4P1-201ENST00000502424 1276 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RN7SKP288-201ENST00000516227 268 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RNA5SP340-201ENST00000517132 107 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC026826.3-201ENST00000561747 158 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AL391597.1-201ENST00000618707 694 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC096708.4-201ENST00000620563 552 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 THAP12P9-201ENST00000503971 2360 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 AC027279.1-201ENST00000568885 4284 ntBASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
BLOC1S4Q9NUP1 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms