Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNB1IP1Q9NPC3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCNB1IP1Q9NPC3 THAP12P9-201ENST00000503971 2360 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 RPL11P4-201ENST00000332269 436 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 PSMA6P1-201ENST00000400275 741 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 OSTCP4-201ENST00000424397 449 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 MTND2P40-201ENST00000436718 841 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 RPL12P49-201ENST00000441100 121 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 RARRES2P3-201ENST00000457739 473 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 NPM1P28-201ENST00000492269 840 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 OR7E157P-201ENST00000494376 911 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC117500.1-201ENST00000497352 755 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 OR7E99P-201ENST00000505750 922 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 MIR3157-201ENST00000578688 85 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC010503.3-201ENST00000594355 540 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC002069.2-201ENST00000603580 883 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC012368.3-201ENST00000604190 219 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC011891.2-201ENST00000604949 397 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC015712.7-201ENST00000615211 635 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC010809.3-201ENST00000621310 641 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AL122023.1-201ENST00000622847 530 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AL161912.4-201ENST00000623889 2468 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 AP000473.2-201ENST00000602659 1537 ntBASIC5.53□□□□□ -1.52
CCNB1IP1Q9NPC3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC020633.1-201ENST00000468439 2247 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 RN7SKP81-201ENST00000365603 331 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 RNA5SP187-201ENST00000384400 119 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 MIR191-201ENST00000384873 92 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 MYL6P5-201ENST00000412707 459 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 Z82198.3-201ENST00000421145 199 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AL136231.1-201ENST00000429407 730 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 MED28P3-201ENST00000444288 531 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 OR2L9P-201ENST00000444456 913 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 RN7SL612P-201ENST00000497704 295 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 SETP21-201ENST00000514799 892 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AP001284.1-201ENST00000528393 2118 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC007346.2-201ENST00000564816 892 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC090826.1-203ENST00000569235 490 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC019322.1-201ENST00000571869 389 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC063977.7-201ENST00000594454 337 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 NDUFB9P1-201ENST00000604683 510 ntBASIC5.52□□□□□ -1.53
CCNB1IP1Q9NPC3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms