Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 HNRNPCP7-201ENST00000456056 905 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 CSF2RA-217ENST00000494969 489 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 OR5M14P-201ENST00000506803 618 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 DKK2-204ENST00000513208 925 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL392112.1-201ENST00000605115 829 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC069304.2-201ENST00000605154 435 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL359715.4-201ENST00000606629 1436 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL355802.3-201ENST00000607571 545 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 MIR6748-201ENST00000610433 71 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC069234.4-201ENST00000621276 412 ntBASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 GAD1-217ENST00000625689 3700 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 LINC01358-207ENST00000634502 2575 ntTSL 5 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 PAX6-259ENST00000639916 2622 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 OR4D9-202ENST00000641278 6063 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
COL25A1Q9BXS0 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 DDI2-202ENST00000480945 10625 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 CSMD2-203ENST00000373377 3212 ntTSL 2 BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 EFNA5-201ENST00000333274 5335 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
COL25A1Q9BXS0 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 KLKB1-201ENST00000264690 2363 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ERC1-213ENST00000543086 9241 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZNF90P1-201ENST00000480493 1951 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 PTPN14-205ENST00000543945 3842 ntTSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 CYP2C9-201ENST00000260682 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 DAZ1-203ENST00000426000 1846 ntTSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 HHAT-203ENST00000367010 3626 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZKSCAN3-202ENST00000341464 1794 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC087392.3-202ENST00000358446 1754 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 KCNE1-206ENST00000432085 3184 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SNORA58B-201ENST00000364259 136 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 Y_RNA.419-201ENST00000384041 102 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 RNU6-932P-201ENST00000391108 106 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SNORA17A-201ENST00000391185 133 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 OLA1P1-201ENST00000396387 1189 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AL356776.1-201ENST00000406574 447 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 RPS4XP16-201ENST00000427198 791 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 LINC01525-201ENST00000442182 511 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 RPL21P33-201ENST00000444831 484 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 COX6CP12-201ENST00000446748 202 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 GAPDHP53-201ENST00000458397 924 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 OR52A4P-201ENST00000472867 958 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 UBTFL6-201ENST00000477929 1024 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 HMGB1P3-201ENST00000502802 616 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC021087.2-201ENST00000504656 1203 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 RNA5SP287-201ENST00000516358 103 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AP005639.1-201ENST00000526939 192 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 HAL-203ENST00000541929 3846 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC090607.2-201ENST00000560331 695 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC034268.2-201ENST00000571784 482 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 PPIAP14-201ENST00000577627 496 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 MIR4502-201ENST00000580432 81 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC138649.3-201ENST00000622154 254 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC008626.2-201ENST00000624425 248 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 SNORA17.5-201ENST00000630429 132 ntBASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 UQCRC2-213ENST00000630839 535 ntTSL 4 BASIC7.64□□□□□ -1.19
COL25A1Q9BXS0 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms