Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MGAT2P2-201ENST00000427194 797 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC087672.1-201ENST00000479876 766 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AP002981.1-201ENST00000517692 975 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AL133482.1-201ENST00000415988 498 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 LINC01881-201ENST00000416103 412 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 IRF5P1-201ENST00000504852 2164 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AL359091.1-201ENST00000449048 1734 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 CDY5P-201ENST00000411487 1580 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 CDY9P-201ENST00000451397 1580 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 SNORA16A-201ENST00000384342 137 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC233699.1-201ENST00000569955 1168 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC116631.1-202ENST00000640984 683 ntBASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 THADA-206ENST00000405006 6310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.79□□□□□ -1.64
CSMD1Q96PZ7 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SNURFL-201ENST00000309296 343 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 RPS4XP9-201ENST00000405151 780 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 SNORA11.2-201ENST00000408318 127 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL591848.1-201ENST00000413092 322 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC091390.2-201ENST00000432573 374 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 OR6D1P-201ENST00000436165 939 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL513533.1-201ENST00000453728 415 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC011447.4-201ENST00000587562 111 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC110716.2-201ENST00000563865 3945 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 OR10R3P-201ENST00000361688 942 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 AC021074.2-201ENST00000468434 172 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 RNU6-941P-201ENST00000516346 108 ntBASIC4.78□□□□□ -1.64
CSMD1Q96PZ7 HMGB1P23-201ENST00000518743 568 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms