Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.17
TRIM11Q96F44 AC011379.1-201ENST00000508713 3025 ntBASIC7.71□□□□□ -1.17
TRIM11Q96F44 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.71□□□□□ -1.17
TRIM11Q96F44 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC7.71□□□□□ -1.17
TRIM11Q96F44 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
TRIM11Q96F44 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RNA5SP448-201ENST00000363151 111 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 RNA5SP260-201ENST00000363849 111 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 CES5AP1-201ENST00000400418 859 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC098592.1-201ENST00000419352 333 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 FTOP1-201ENST00000419363 861 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RPL23AP85-201ENST00000421838 433 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 IPPKP1-201ENST00000422501 768 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AL591846.2-201ENST00000425161 358 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RPSAP62-201ENST00000432596 833 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC108039.2-201ENST00000440214 359 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 TXNP2-201ENST00000443918 295 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 CASP3P1-201ENST00000446037 609 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 MTND4P19-201ENST00000446659 478 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC021074.2-201ENST00000468434 172 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 RN7SL338P-201ENST00000481467 293 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 RPS6P4-201ENST00000494693 758 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RNU6-718P-201ENST00000516166 105 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 CENPUP1-201ENST00000526649 1202 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CRADD-210ENST00000552033 622 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 OR4F28P-201ENST00000559128 938 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RBM22P1-201ENST00000578589 1214 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 OR4F8P-201ENST00000589943 937 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 IMMP1LP1-201ENST00000605170 488 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AC128687.1-201ENST00000605304 619 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 AL121809.2-201ENST00000613169 341 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 MED24-234ENST00000614384 454 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CT45A9-202ENST00000620704 1010 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 TSHZ2-205ENST00000626626 670 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 AL590396.3-201ENST00000636334 300 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 SAMMSON-203ENST00000641005 2168 ntBASIC7.71□□□□□ -1.18
TRIM11Q96F44 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
TRIM11Q96F44 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 AC006116.1-201ENST00000587908 2171 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 ZNF816-203ENST00000357666 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 TTC39B-206ENST00000507285 2243 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 SNORA73B-201ENST00000363217 204 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 RNU4-51P-201ENST00000364206 140 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 MIR1204-201ENST00000408388 67 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 IFNA12P-201ENST00000413147 571 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 GNAI2P2-201ENST00000417003 916 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 AL390840.1-201ENST00000420303 988 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 AL590714.1-201ENST00000420498 379 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 FNDC3CP-201ENST00000420795 1155 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 AC114752.2-201ENST00000424119 404 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 HBBP1-201ENST00000433329 439 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 ARMC8P1-201ENST00000443069 1289 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 LINC00460-203ENST00000444865 739 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
TRIM11Q96F44 HMGB3P6-201ENST00000444896 598 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC7.7□□□□□ -1.18
TRIM11Q96F44 PMS2P11-201ENST00000451831 574 ntBASIC7.7□□□□□ -1.18
TRIM11Q96F44 PYM1-204ENST00000454792 884 ntTSL 2 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms