Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 MIR188-201ENST00000385034 86 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 UBE2V1P15-201ENST00000407776 448 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AL590762.3-201ENST00000436372 640 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC009237.1-201ENST00000442127 744 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC007383.1-201ENST00000445875 636 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC104849.1-201ENST00000462623 405 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 SEC11B-201ENST00000518383 499 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC009879.1-201ENST00000520029 839 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 OLR1-209ENST00000543993 822 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AL499605.1-201ENST00000604628 403 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC073593.1-201ENST00000624500 411 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC073488.6-201ENST00000632293 754 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 EIF3EP1-201ENST00000433978 1316 ntBASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.49□□□□□ -1.21
CHMP4CQ96CF2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 OR56A4-201ENST00000330728 1209 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 SNORA27.3-201ENST00000364937 134 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL353625.1-202ENST00000366273 571 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL035422.1-201ENST00000414193 397 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 MRPS33P4-201ENST00000434892 317 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 VPS25P1-201ENST00000455691 508 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 OR4H6P-202ENST00000603819 340 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 AL133243.2-201ENST00000610331 1621 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 SAMMSON-210ENST00000641260 1308 ntBASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CHMP4CQ96CF2 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AL360271.1-201ENST00000395679 510 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 RBBP4P5-201ENST00000398583 1266 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 TMA16P2-201ENST00000413187 601 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 VN1R31P-201ENST00000417498 730 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC110602.1-201ENST00000437414 318 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AL133351.3-201ENST00000454998 193 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 RNA5SP400-201ENST00000517155 111 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 ODF1-202ENST00000518835 368 ntTSL 3 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC074029.2-201ENST00000551045 634 ntBASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC7.47□□□□□ -1.21
CHMP4CQ96CF2 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms