Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AL513218.1-201ENST00000606527 391 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC073488.3-201ENST00000631611 778 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CASC19-243ENST00000641588 1546 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC009120.2-204ENST00000621548 2032 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HMGB4Q8WW32 AC005034.3-201ENST00000604845 1747 ntBASIC6.28□□□□□ -1.4
HMGB4Q8WW32 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
HMGB4Q8WW32 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
HMGB4Q8WW32 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AL132656.3-201ENST00000606384 1595 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 OR2M1P-201ENST00000318104 951 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 TMSB4XP2-201ENST00000335179 210 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 MIR365B-201ENST00000362317 111 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC087752.1-201ENST00000391360 558 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC091390.2-201ENST00000432573 374 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AL161636.2-201ENST00000445179 927 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC074386.1-201ENST00000476560 767 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC025768.1-201ENST00000510057 267 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC106800.2-201ENST00000514009 1103 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC092451.2-201ENST00000538746 658 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC122134.1-202ENST00000569111 1201 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC098483.2-201ENST00000603158 454 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC108673.3-201ENST00000609183 335 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AC109309.2-201ENST00000612597 332 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 ZNF101P1-201ENST00000435701 1720 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 CR382285.2-201ENST00000624662 1495 ntBASIC6.27□□□□□ -1.41
HMGB4Q8WW32 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HMGB4Q8WW32 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 PSG10P-201ENST00000501199 1500 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 RNFT1P3-201ENST00000340898 1052 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC079355.1-201ENST00000421770 223 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 MORF4-201ENST00000447135 971 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 VN1R48P-201ENST00000448149 1036 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 RPL31P20-201ENST00000449593 360 ntBASIC6.26□□□□□ -1.41
HMGB4Q8WW32 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.26□□□□□ -1.41
HMGB4Q8WW32 AC108157.1-201ENST00000510511 539 ntBASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms