Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AL672212.1-201ENST00000422246 400 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 RPL3P11-201ENST00000434028 1146 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 NANOGNBP1-201ENST00000448444 480 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 RNU6-507P-201ENST00000516045 100 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC103833.1-201ENST00000517442 172 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC131935.1-201ENST00000524621 333 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 BLZF2P-201ENST00000553776 1130 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 PPIAP6-201ENST00000557078 499 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC010287.1-201ENST00000566916 357 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC027796.1-201ENST00000575593 512 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 NPM1P45-201ENST00000583151 559 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC090186.1-201ENST00000605991 572 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 MRPL57P3-201ENST00000619218 176 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AP002505.2-201ENST00000623585 696 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 OR5M2P-202ENST00000641241 4242 ntBASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NEDD1Q8NHV4 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 BX005019.1-201ENST00000561881 1810 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC092447.7-201ENST00000422212 1621 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC092326.2-201ENST00000624772 1561 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CASC19-205ENST00000641013 1411 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RN7SKP189-201ENST00000365042 330 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 DEFB108C-201ENST00000400154 252 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AL136100.1-201ENST00000407696 330 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 UBE2V1P9-201ENST00000414760 368 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 NIFKP3-201ENST00000417799 865 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC013429.2-201ENST00000418798 781 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 NDUFAF4P2-201ENST00000445374 520 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC093392.2-201ENST00000450682 337 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC073476.1-201ENST00000452854 407 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RPS26P11-201ENST00000463445 348 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RPL31P58-201ENST00000469001 379 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 RPS26P6-201ENST00000475156 348 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC112225.1-201ENST00000508230 297 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC109458.1-201ENST00000508858 316 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 DUXAP2-201ENST00000519198 589 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 OR7E154P-201ENST00000525174 932 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 NXPE2P1-201ENST00000543705 726 ntBASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC8.15□□□□□ -1.1
NEDD1Q8NHV4 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms