Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MTCO1P40-201ENST00000574371 625 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 7SK.7-201ENST00000603504 247 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC136443.5-201ENST00000603741 370 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC024085.1-201ENST00000604299 432 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC005070.2-201ENST00000604391 260 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 RN7SL778P-201ENST00000607160 297 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC012640.3-201ENST00000607847 430 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AL022238.3-201ENST00000609279 443 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AL359535.1-201ENST00000612100 1087 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC244100.4-201ENST00000617747 388 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC021106.3-201ENST00000623925 531 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 OR1S1-201ENST00000624470 978 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC018880.1-201ENST00000418898 1319 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 NEK2P4-201ENST00000425793 1329 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AL022578.1-201ENST00000439330 1433 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 TEX21P-201ENST00000447107 1476 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 INPP4B-212ENST00000507861 1506 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AL137918.1-201ENST00000624542 1922 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 C1GALT1-201ENST00000223122 6078 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 MAPK10-333ENST00000641607 2481 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 CEBPZOS-204ENST00000402297 3158 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 SERPINB13-201ENST00000269489 3206 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 Z97832.2-201ENST00000605896 4261 ntBASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 LMO7-207ENST00000465261 5580 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
NPAS3Q8IXF0 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 LINC00294-201ENST00000631190 3306 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 GC-201ENST00000273951 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 MTND5P3-201ENST00000438536 1800 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AP000641.1-201ENST00000531988 1639 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AL359694.2-201ENST00000567753 1615 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC007923.2-201ENST00000584218 1591 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 WASF5P-205ENST00000428639 1455 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 EEF1A1P22-201ENST00000559385 1380 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 POT1-201ENST00000357628 4080 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 FCAR-204ENST00000359272 828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 RN7SKP63-201ENST00000363187 301 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 RNU6-236P-201ENST00000363886 106 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 NR1I3-203ENST00000367981 1076 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 Y_RNA.401-201ENST00000383965 117 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 RNU4-70P-201ENST00000384579 139 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC090114.1-201ENST00000393266 448 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 TAF9BP2-201ENST00000400856 499 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 GAS8-AS1-201ENST00000408886 435 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AP000357.1-201ENST00000409926 1165 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 RN7SKP131-201ENST00000410698 301 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 OFD1P2Y-201ENST00000421895 1149 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 PHB2P1-201ENST00000434943 890 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 BRK1P2-201ENST00000442875 223 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 OR7E125P-201ENST00000443450 846 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 TRIM60P16-201ENST00000444048 694 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 FGF7P3-201ENST00000454645 303 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 YAP1P2-201ENST00000455104 610 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 EIF3LP2-201ENST00000457262 807 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 RPL7AP52-201ENST00000458096 790 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 TDGF1P6-201ENST00000463873 448 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC022730.1-201ENST00000473114 568 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 FAM172BP-201ENST00000487497 1089 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC021087.2-201ENST00000504656 1203 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC008868.1-201ENST00000509786 737 ntBASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC7.9□□□□□ -1.14
NPAS3Q8IXF0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.9□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms