Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC138965.3-201ENST00000623875 498 ntBASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 THAP12P9-201ENST00000503971 2360 ntBASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 LINC02019-201ENST00000608605 2060 ntBASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 LINC01613-201ENST00000561476 2780 ntBASIC6.29□□□□□ -1.4
CCDC50Q8IVM0 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC140479.2-201ENST00000421567 3130 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 RN7SKP69-201ENST00000365390 305 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AL132875.1-201ENST00000403623 949 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 HMGN2P27-201ENST00000427352 270 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 ZNF619P1-201ENST00000446539 752 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC016027.4-201ENST00000450866 277 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC012123.2-201ENST00000485809 248 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 RPL12P30-201ENST00000488389 499 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 OR5D2P-201ENST00000524390 911 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 WBP1LP11-201ENST00000586141 328 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 NDUFB9P1-201ENST00000604683 510 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AL138693.1-201ENST00000622219 129 ntBASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC50Q8IVM0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 MYL6P5-201ENST00000412707 459 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 DPPA2P2-201ENST00000418220 897 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RPL35AP31-201ENST00000418340 337 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 NMD3P2-201ENST00000421815 761 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RPL12P12-201ENST00000424633 501 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 USP24P1-201ENST00000433802 779 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC073410.1-201ENST00000435125 589 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RPL5P25-201ENST00000441148 775 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 TOMM22P4-201ENST00000511318 336 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 NPM1P21-201ENST00000513394 762 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 DPPA3P2-202ENST00000557188 1219 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC119403.2-201ENST00000590960 598 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 WBP1LP12-201ENST00000604449 331 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC018690.1-201ENST00000608144 626 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC079776.5-201ENST00000641920 211 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 AC004076.2-201ENST00000620532 3323 ntBASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCDC50Q8IVM0 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
CCDC50Q8IVM0 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms