Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RAB43Q86YS6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC233702.7-202ENST00000582941 211 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC024589.2-201ENST00000605642 1294 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC006924.1-201ENST00000610750 559 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AL357153.4-201ENST00000620487 1016 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC129915.3-201ENST00000634128 948 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AL133243.2-201ENST00000610331 1621 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.8□□□□□ -1.48
RAB43Q86YS6 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RAB43Q86YS6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RAB43Q86YS6 AL355834.1-201ENST00000556602 3965 ntBASIC5.8□□□□□ -1.48
RAB43Q86YS6 AC008627.1-201ENST00000517511 1704 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC011815.2-201ENST00000618230 2021 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 RN7SKP78-201ENST00000364711 318 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 UBE2V1P14-201ENST00000415815 558 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 AL390879.1-201ENST00000439143 386 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 TRIM60P16-201ENST00000444048 694 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 OR2AF1P-201ENST00000454899 889 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 OR51A1P-201ENST00000511110 946 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 RNA5SP271-201ENST00000516700 88 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC021269.1-201ENST00000526860 705 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC093524.1-201ENST00000564266 1094 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC068768.2-201ENST00000602352 343 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AC100767.2-201ENST00000604840 693 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 MIR4302-201ENST00000638058 60 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 AL137141.1-201ENST00000624622 4836 ntBASIC5.79□□□□□ -1.48
RAB43Q86YS6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RAB43Q86YS6 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.79□□□□□ -1.48
RAB43Q86YS6 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 OR7E25P-201ENST00000344844 931 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 NPM1P37-201ENST00000403105 874 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RAB43Q86YS6 RPL5P2-201ENST00000429598 854 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 SETP20-201ENST00000457046 852 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC108751.3-201ENST00000461814 1020 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 NPM1P27-201ENST00000502784 830 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC006499.4-201ENST00000510947 694 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.78□□□□□ -1.48
RAB43Q86YS6 OR5H7P-201ENST00000514084 930 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 SCARNA18.1-201ENST00000516330 83 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 RNA5SP400-201ENST00000517155 111 ntBASIC5.78□□□□□ -1.48
RAB43Q86YS6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms