Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC121334.1-201ENST00000396414 802 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 ARSFP1-201ENST00000398758 477 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL603865.2-201ENST00000401679 213 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AF274855.1-201ENST00000411474 850 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 MEG8-201ENST00000414488 800 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL022331.1-201ENST00000429025 477 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 BX005266.3-201ENST00000443013 1075 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 EPS15P1-201ENST00000448836 336 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC097262.1-201ENST00000452559 548 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 MTND2P24-201ENST00000453434 806 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC079193.1-201ENST00000460497 588 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC126615.1-201ENST00000470084 630 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC011825.1-201ENST00000484967 388 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 RN7SL849P-201ENST00000485236 295 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 PABPC1P1-201ENST00000506347 591 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 NACAP5-201ENST00000509863 636 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 RN7SKP34-201ENST00000516142 244 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 ST13P6-201ENST00000522430 1102 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AP005639.2-201ENST00000527592 928 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC090971.3-201ENST00000557871 1041 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC136619.2-201ENST00000563361 631 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC023813.2-201ENST00000564321 469 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 ELOCP28-201ENST00000590044 317 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 DUXAP11-201ENST00000603858 526 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL359094.1-211ENST00000608350 335 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC007497.1-201ENST00000610421 561 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL590410.1-201ENST00000617925 333 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC211433.3-201ENST00000623770 375 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC007603.3-201ENST00000636915 979 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 AL596275.2-208ENST00000641192 594 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 TBX5-202ENST00000349716 3585 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC084782.1-201ENST00000564401 2465 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 CRBN-201ENST00000231948 2206 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC090643.1-201ENST00000623600 3100 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 AC007012.2-201ENST00000623206 1676 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 DAZ2-208ENST00000400493 3516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RNF43Q68DV7 OR52K3P-202ENST00000641797 1729 ntBASIC7.44□□□□□ -1.22
RNF43Q68DV7 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.44□□□□□ -1.22
RNF43Q68DV7 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 Z93929.1-201ENST00000418200 1475 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 CRYZ-201ENST00000340866 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 SLC9A9-201ENST00000316549 3627 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 MFSD8-256ENST00000641949 1640 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 RNA5SP114-201ENST00000363780 113 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 RNU4-92P-201ENST00000363783 136 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 RNU1-24P-201ENST00000364285 165 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
RNF43Q68DV7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC7.43□□□□□ -1.22
RNF43Q68DV7 SNORD116-12-201ENST00000384468 92 ntBASIC7.43□□□□□ -1.22
RNF43Q68DV7 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC7.43□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms