Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC022819.1-201ENST00000563495 3910 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 CTAGE11P-201ENST00000451540 2353 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 Y_RNA.126-201ENST00000363382 111 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 RN7SKP113-201ENST00000363891 295 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 GAPDHP42-201ENST00000406848 981 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPS23P9-201ENST00000448848 438 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC034236.1-201ENST00000469891 373 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 RN7SL570P-201ENST00000484405 292 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPL37AP8-201ENST00000494116 276 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC007485.2-201ENST00000623493 1667 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 CCDC162P-202ENST00000368966 6751 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC123769.2-201ENST00000624332 5984 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPL5P5-201ENST00000392009 893 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPS16P5-201ENST00000406501 404 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AL360081.1-201ENST00000428299 555 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPL7L1P9-201ENST00000431298 745 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 RPL5P9-201ENST00000448118 886 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC004129.2-201ENST00000457229 287 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 C1GALT1P3-201ENST00000522049 819 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.13□□□□□ -1.59
LRRK2Q5S007 AP000919.1-201ENST00000582850 985 ntBASIC5.13□□□□□ -1.59
LRRK2Q5S007 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 LCOR-201ENST00000286067 4542 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 AC005294.1-201ENST00000355509 281 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL023284.3-201ENST00000407767 334 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 RPS27AP6-201ENST00000427962 448 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL049745.1-201ENST00000433953 286 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 PRPF38AP2-201ENST00000438179 851 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 DEFA11P-201ENST00000446470 261 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL035090.1-201ENST00000454835 332 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 RN7SL354P-201ENST00000469282 294 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 RN7SL459P-201ENST00000481078 302 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 AC010343.2-201ENST00000510162 224 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL109618.2-201ENST00000605527 211 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 MIR6758-201ENST00000620653 63 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 RNA5SP211-201ENST00000365516 117 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
LRRK2Q5S007 MIR541-201ENST00000401360 84 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 NPM1P51-201ENST00000443470 744 ntBASIC5.12□□□□□ -1.59
LRRK2Q5S007 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.12□□□□□ -1.59
LRRK2Q5S007 CREM-208ENST00000361599 2170 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms