Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 HMGA1P8-201ENST00000414130 321 ntBASIC5.74□□□□□ -1.49
VSX2P58304 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 NMD3P2-201ENST00000421815 761 ntBASIC5.74□□□□□ -1.49
VSX2P58304 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 HLA-DPA3-207ENST00000454398 229 ntBASIC5.74□□□□□ -1.49
VSX2P58304 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 ACA64.1-201ENST00000459171 127 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC094085.1-201ENST00000468914 584 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.74□□□□□ -1.49
VSX2P58304 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.74□□□□□ -1.49
VSX2P58304 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.74□□□□□ -1.49
VSX2P58304 AC110056.1-201ENST00000525759 911 ntBASIC5.74□□□□□ -1.49
VSX2P58304 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VSX2P58304 DPPA3P2-202ENST00000557188 1219 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 AC005244.1-201ENST00000582566 339 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AL021918.2-201ENST00000613415 194 ntBASIC5.74□□□□□ -1.49
VSX2P58304 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.74□□□□□ -1.49
VSX2P58304 FO681491.1-202ENST00000623392 737 ntBASIC5.74□□□□□ -1.49
VSX2P58304 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AF287957.1-201ENST00000607368 1595 ntBASIC5.74□□□□□ -1.49
VSX2P58304 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AC016583.1-201ENST00000624221 2431 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC012254.3-201ENST00000591183 2117 ntBASIC5.74□□□□□ -1.49
VSX2P58304 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.74□□□□□ -1.49
VSX2P58304 AP000432.2-201ENST00000624164 2048 ntBASIC5.74□□□□□ -1.49
VSX2P58304 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSX2P58304 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.74□□□□□ -1.49
VSX2P58304 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 TMSB4XP2-201ENST00000335179 210 ntBASIC5.73□□□□□ -1.49
VSX2P58304 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 AL096711.1-201ENST00000404780 554 ntBASIC5.73□□□□□ -1.49
VSX2P58304 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 PTCD2P2-201ENST00000415579 1095 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 RN7SL269P-201ENST00000467795 305 ntBASIC5.73□□□□□ -1.49
VSX2P58304 PPP1R11P1-201ENST00000486095 376 ntBASIC5.73□□□□□ -1.49
VSX2P58304 RPL23AP40-201ENST00000487630 390 ntBASIC5.73□□□□□ -1.49
VSX2P58304 RN7SL193P-201ENST00000491708 276 ntBASIC5.73□□□□□ -1.49
VSX2P58304 CCDC11P1-201ENST00000503137 1162 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 Y_RNA.667-201ENST00000516212 107 ntBASIC5.73□□□□□ -1.49
VSX2P58304 RNA5SP438-201ENST00000516561 112 ntBASIC5.73□□□□□ -1.49
VSX2P58304 IGKV2-19-201ENST00000518132 283 ntBASIC5.73□□□□□ -1.49
VSX2P58304 WBP1LP3-201ENST00000523033 208 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.73□□□□□ -1.49
VSX2P58304 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.73□□□□□ -1.49
VSX2P58304 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 AC090651.1-201ENST00000567865 634 ntBASIC5.73□□□□□ -1.49
VSX2P58304 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 AC119403.2-201ENST00000590960 598 ntBASIC5.73□□□□□ -1.49
VSX2P58304 MIR132-201ENST00000591554 101 ntBASIC5.73□□□□□ -1.49
VSX2P58304 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.73□□□□□ -1.49
VSX2P58304 AL365181.4-201ENST00000609800 547 ntBASIC5.73□□□□□ -1.49
VSX2P58304 MIR6809-201ENST00000612189 116 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AL096712.1-201ENST00000614561 159 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AL031658.2-201ENST00000616850 651 ntBASIC5.73□□□□□ -1.49
VSX2P58304 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.73□□□□□ -1.49
VSX2P58304 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSX2P58304 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VSX2P58304 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms