Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.38□□□□□ -1.39
RXRGP48443 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.38□□□□□ -1.39
RXRGP48443 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.38□□□□□ -1.39
RXRGP48443 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 OSBPL9P1-201ENST00000604744 1469 ntBASIC6.38□□□□□ -1.39
RXRGP48443 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 AC007485.2-201ENST00000623493 1667 ntBASIC6.38□□□□□ -1.39
RXRGP48443 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RXRGP48443 AC009120.2-204ENST00000621548 2032 ntBASIC6.38□□□□□ -1.39
RXRGP48443 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
RXRGP48443 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
RXRGP48443 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.38□□□□□ -1.39
RXRGP48443 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
RXRGP48443 DNM1P47-203ENST00000571780 12667 ntBASIC6.38□□□□□ -1.39
RXRGP48443 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
RXRGP48443 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RXRGP48443 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 Z95114.1-201ENST00000624264 14574 ntBASIC6.37□□□□□ -1.39
RXRGP48443 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 OR51C1P-202ENST00000641159 1444 ntBASIC6.37□□□□□ -1.39
RXRGP48443 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
RXRGP48443 RNA5SP350-201ENST00000363298 111 ntBASIC6.37□□□□□ -1.39
RXRGP48443 RNA5SP435-201ENST00000364044 108 ntBASIC6.37□□□□□ -1.39
RXRGP48443 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 SNORA70H-201ENST00000383910 135 ntBASIC6.37□□□□□ -1.39
RXRGP48443 SNORA70J-201ENST00000384182 135 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AL358178.1-201ENST00000407698 397 ntBASIC6.37□□□□□ -1.39
RXRGP48443 SNORA77.2-201ENST00000408571 112 ntBASIC6.37□□□□□ -1.39
RXRGP48443 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
RXRGP48443 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 NDUFA5P1-201ENST00000433858 341 ntBASIC6.37□□□□□ -1.39
RXRGP48443 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.37□□□□□ -1.39
RXRGP48443 AL606490.8-201ENST00000441624 319 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AC010240.2-201ENST00000445363 1205 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AC009963.3-201ENST00000458090 486 ntBASIC6.37□□□□□ -1.39
RXRGP48443 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 RN7SL221P-201ENST00000466190 281 ntBASIC6.37□□□□□ -1.39
RXRGP48443 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRGP48443 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 AP002453.1-201ENST00000492327 668 ntBASIC6.37□□□□□ -1.39
RXRGP48443 PCNAP1-201ENST00000505363 709 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRGP48443 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.37□□□□□ -1.39
RXRGP48443 GLYATL1P2-202ENST00000588046 902 ntBASIC6.37□□□□□ -1.39
RXRGP48443 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 AC097467.4-201ENST00000605504 141 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AL353729.2-201ENST00000605859 1249 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AC108865.2-201ENST00000606881 432 ntBASIC6.37□□□□□ -1.39
RXRGP48443 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.37□□□□□ -1.39
RXRGP48443 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.37□□□□□ -1.39
RXRGP48443 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
RXRGP48443 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRGP48443 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRGP48443 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
RXRGP48443 RLIMP2-201ENST00000427891 1563 ntBASIC6.36□□□□□ -1.39
RXRGP48443 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRGP48443 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.36□□□□□ -1.39
RXRGP48443 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
RXRGP48443 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC6.36□□□□□ -1.39
RXRGP48443 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
RXRGP48443 RNU11-6P-201ENST00000391127 133 ntBASIC6.36□□□□□ -1.39
RXRGP48443 AP003170.5-201ENST00000397185 335 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms