Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC124916.2-201ENST00000604416 224 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 AP005131.7-201ENST00000610087 611 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AC106730.3-201ENST00000624568 641 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 AL357562.1-201ENST00000624911 609 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 CASC19-274ENST00000642018 970 ntBASIC6.33□□□□□ -1.4
PTPN9P43378 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
PTPN9P43378 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.33□□□□□ -1.4
PTPN9P43378 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTPN9P43378 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN9P43378 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC083837.1-201ENST00000565297 2994 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
PTPN9P43378 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 RNU1-59P-201ENST00000364829 162 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC114878.1-201ENST00000441166 358 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC093827.1-201ENST00000480094 861 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 COL6A4P2-205ENST00000509855 506 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 HSD3BP3-201ENST00000514706 994 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 OR56A7P-201ENST00000524865 941 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.32□□□□□ -1.4
PTPN9P43378 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC009268.1-201ENST00000561352 1203 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AC007346.1-201ENST00000569208 867 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 MIR3154-201ENST00000577829 84 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.32□□□□□ -1.4
PTPN9P43378 AL352984.2-202ENST00000613699 155 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 U1.25-201ENST00000614085 162 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 U1.34-201ENST00000618578 162 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 U1.31-201ENST00000620022 160 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 AC020923.1-201ENST00000624021 917 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
PTPN9P43378 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.32□□□□□ -1.4
PTPN9P43378 AC079753.1-201ENST00000623243 3868 ntBASIC6.32□□□□□ -1.4
PTPN9P43378 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTPN9P43378 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTPN9P43378 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.31□□□□□ -1.4
PTPN9P43378 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 RNA5SP232-201ENST00000364144 119 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 SNORA70.9-201ENST00000384370 135 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
PTPN9P43378 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 GCNT1P4-201ENST00000404096 329 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 MYL6P5-201ENST00000412707 459 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AC245096.1-201ENST00000413104 546 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN9P43378 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.31□□□□□ -1.4
PTPN9P43378 NPM1P25-201ENST00000429734 854 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AL390879.1-201ENST00000439143 386 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 EEF1B2P3-201ENST00000447718 678 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AC093166.3-201ENST00000448785 303 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 AC124945.1-201ENST00000485133 188 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 AC021006.1-201ENST00000489849 553 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 CCDC11P1-201ENST00000503137 1162 ntBASIC6.31□□□□□ -1.4
PTPN9P43378 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.31□□□□□ -1.4
PTPN9P43378 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
PTPN9P43378 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.31□□□□□ -1.4
PTPN9P43378 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms