Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RBMY2DP-202ENST00000448881 1157 ntBASIC5.47□□□□□ -1.53
SHC1P29353 RBMY2BP-202ENST00000451071 1156 ntBASIC5.47□□□□□ -1.53
SHC1P29353 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.47□□□□□ -1.53
SHC1P29353 SNRPCP3-201ENST00000474888 476 ntBASIC5.47□□□□□ -1.53
SHC1P29353 CR383656.1-201ENST00000484916 377 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 RBBP4P1-201ENST00000502424 1276 ntBASIC5.47□□□□□ -1.53
SHC1P29353 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 RNA5SP340-201ENST00000517132 107 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.47□□□□□ -1.53
SHC1P29353 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 AC092332.1-201ENST00000563684 829 ntBASIC5.47□□□□□ -1.53
SHC1P29353 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 AC002310.3-201ENST00000569728 723 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AP001357.1-201ENST00000586304 1053 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.47□□□□□ -1.53
SHC1P29353 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 AL353729.2-201ENST00000605859 1249 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AL645933.2-201ENST00000606743 1207 ntBASIC5.47□□□□□ -1.53
SHC1P29353 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.47□□□□□ -1.53
SHC1P29353 AL357562.1-201ENST00000624911 609 ntBASIC5.47□□□□□ -1.53
SHC1P29353 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC5.47□□□□□ -1.53
SHC1P29353 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 HSPD1P9-201ENST00000420325 1636 ntBASIC5.47□□□□□ -1.53
SHC1P29353 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 LYARP1-201ENST00000436977 1501 ntBASIC5.47□□□□□ -1.53
SHC1P29353 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.47□□□□□ -1.53
SHC1P29353 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 AC093225.1-201ENST00000506867 1408 ntBASIC5.47□□□□□ -1.53
SHC1P29353 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHC1P29353 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHC1P29353 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.46□□□□□ -1.53
SHC1P29353 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.46□□□□□ -1.53
SHC1P29353 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHC1P29353 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 COX6B1P3-201ENST00000312310 260 ntBASIC5.46□□□□□ -1.54
SHC1P29353 RNU105B-201ENST00000364478 208 ntBASIC5.46□□□□□ -1.54
SHC1P29353 VN1R12P-201ENST00000403778 876 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 NPM1P25-201ENST00000429734 854 ntBASIC5.46□□□□□ -1.54
SHC1P29353 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 RPS3AP38-201ENST00000435889 763 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.46□□□□□ -1.54
SHC1P29353 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.46□□□□□ -1.54
SHC1P29353 AC098847.1-201ENST00000473094 348 ntBASIC5.46□□□□□ -1.54
SHC1P29353 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.46□□□□□ -1.54
SHC1P29353 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.46□□□□□ -1.54
SHC1P29353 TPM3P3-201ENST00000521343 354 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.46□□□□□ -1.54
SHC1P29353 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 CYCSP38-201ENST00000559840 322 ntBASIC5.46□□□□□ -1.54
SHC1P29353 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.46□□□□□ -1.54
SHC1P29353 MIR4271-201ENST00000582451 67 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.46□□□□□ -1.54
SHC1P29353 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 AP001437.1-201ENST00000608783 456 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AC016252.1-201ENST00000609721 474 ntBASIC5.46□□□□□ -1.54
SHC1P29353 uc_338.26-201ENST00000612659 160 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AC096861.1-201ENST00000616652 240 ntBASIC5.46□□□□□ -1.54
SHC1P29353 AP001052.1-201ENST00000626421 99 ntBASIC5.46□□□□□ -1.54
SHC1P29353 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 MAPK10-350ENST00000641777 965 ntBASIC5.46□□□□□ -1.54
SHC1P29353 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 AC138907.8-201ENST00000623981 2256 ntBASIC5.46□□□□□ -1.54
SHC1P29353 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHC1P29353 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.46□□□□□ -1.54
SHC1P29353 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHC1P29353 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.46□□□□□ -1.54
SHC1P29353 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHC1P29353 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.45□□□□□ -1.54
SHC1P29353 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.45□□□□□ -1.54
SHC1P29353 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms