Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC087269.2-201ENST00000641764 975 ntBASIC6.48□□□□□ -1.37
VTNP04004 MARK2P4-201ENST00000503381 2380 ntBASIC6.48□□□□□ -1.37
VTNP04004 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.48□□□□□ -1.37
VTNP04004 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VTNP04004 AC022034.1-201ENST00000512867 2156 ntBASIC6.48□□□□□ -1.37
VTNP04004 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTNP04004 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTNP04004 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.48□□□□□ -1.37
VTNP04004 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VTNP04004 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.47□□□□□ -1.37
VTNP04004 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VTNP04004 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
VTNP04004 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 U3.25-201ENST00000391209 220 ntBASIC6.47□□□□□ -1.37
VTNP04004 SDHDP6-201ENST00000414693 480 ntBASIC6.47□□□□□ -1.37
VTNP04004 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 RPS17P17-201ENST00000419392 409 ntBASIC6.47□□□□□ -1.37
VTNP04004 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VTNP04004 AL731534.1-201ENST00000434711 269 ntBASIC6.47□□□□□ -1.37
VTNP04004 DNAJC19P5-201ENST00000443295 316 ntBASIC6.47□□□□□ -1.37
VTNP04004 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 AL162739.1-201ENST00000450606 307 ntBASIC6.47□□□□□ -1.37
VTNP04004 RPS27AP2-201ENST00000457576 465 ntBASIC6.47□□□□□ -1.37
VTNP04004 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 AC099521.1-201ENST00000482557 334 ntBASIC6.47□□□□□ -1.37
VTNP04004 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 SCARNA21.2-201ENST00000516600 166 ntBASIC6.47□□□□□ -1.37
VTNP04004 SNORA81.2-201ENST00000516868 170 ntBASIC6.47□□□□□ -1.37
VTNP04004 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VTNP04004 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.47□□□□□ -1.37
VTNP04004 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.47□□□□□ -1.37
VTNP04004 AL683813.2-201ENST00000605245 502 ntBASIC6.47□□□□□ -1.37
VTNP04004 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC6.47□□□□□ -1.37
VTNP04004 RN7SL544P-201ENST00000617232 284 ntBASIC6.47□□□□□ -1.37
VTNP04004 RN7SL763P-201ENST00000620922 284 ntBASIC6.47□□□□□ -1.37
VTNP04004 AC022919.1-201ENST00000624979 626 ntBASIC6.47□□□□□ -1.37
VTNP04004 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VTNP04004 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VTNP04004 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
VTNP04004 AC087565.3-203ENST00000641018 837 ntBASIC6.47□□□□□ -1.37
VTNP04004 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
VTNP04004 XKRY2-202ENST00000623874 1581 ntBASIC6.47□□□□□ -1.37
VTNP04004 XKRY-202ENST00000624960 1581 ntBASIC6.47□□□□□ -1.37
VTNP04004 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.47□□□□□ -1.37
VTNP04004 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
VTNP04004 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC6.46□□□□□ -1.37
VTNP04004 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VTNP04004 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
VTNP04004 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
VTNP04004 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 AP003170.5-201ENST00000397185 335 ntBASIC6.46□□□□□ -1.38
VTNP04004 RPL34P3-201ENST00000421454 338 ntBASIC6.46□□□□□ -1.38
VTNP04004 AL662874.1-201ENST00000426065 230 ntBASIC6.46□□□□□ -1.38
VTNP04004 HMGB3P24-201ENST00000433260 622 ntBASIC6.46□□□□□ -1.38
VTNP04004 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.46□□□□□ -1.38
VTNP04004 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.46□□□□□ -1.38
VTNP04004 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.46□□□□□ -1.38
VTNP04004 RPL7L1P4-201ENST00000513004 707 ntBASIC6.46□□□□□ -1.38
VTNP04004 RNA5SP362-201ENST00000516048 118 ntBASIC6.46□□□□□ -1.38
VTNP04004 AC022404.1-201ENST00000555320 273 ntBASIC6.46□□□□□ -1.38
VTNP04004 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.46□□□□□ -1.38
VTNP04004 AC090651.1-201ENST00000567865 634 ntBASIC6.46□□□□□ -1.38
VTNP04004 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.46□□□□□ -1.38
VTNP04004 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.46□□□□□ -1.38
VTNP04004 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
VTNP04004 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.46□□□□□ -1.38
VTNP04004 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.46□□□□□ -1.38
VTNP04004 AL137246.2-201ENST00000613439 662 ntBASIC6.46□□□□□ -1.38
VTNP04004 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.46□□□□□ -1.38
VTNP04004 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.46□□□□□ -1.38
VTNP04004 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.46□□□□□ -1.38
VTNP04004 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 AC073342.2-201ENST00000595842 1800 ntBASIC6.46□□□□□ -1.38
VTNP04004 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
VTNP04004 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
VTNP04004 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
VTNP04004 RPS2P45-201ENST00000469997 2057 ntBASIC6.45□□□□□ -1.38
VTNP04004 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
VTNP04004 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.45□□□□□ -1.38
VTNP04004 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms