Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL353718.1-201ENST00000451028 517 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 SLC25A51P1-201ENST00000468432 871 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC044810.1-201ENST00000480271 711 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC021269.1-201ENST00000526860 705 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 OR4A41P-201ENST00000533053 928 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC121758.1-202ENST00000556917 658 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC092868.3-201ENST00000560515 784 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 MIR4701-201ENST00000583094 63 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.68□□□□□ -1.5
NKX2-2O95096 MIMT1-201ENST00000597105 1050 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 OR4H6P-202ENST00000603819 340 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AC099654.15-201ENST00000639802 509 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 AC087269.2-201ENST00000641764 975 ntBASIC5.68□□□□□ -1.5
NKX2-2O95096 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
NKX2-2O95096 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
NKX2-2O95096 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
NKX2-2O95096 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.68□□□□□ -1.5
NKX2-2O95096 SAMM50P1-201ENST00000455403 1399 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 AP000641.1-201ENST00000531988 1639 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AL121768.1-201ENST00000613917 2544 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 AC092724.1-201ENST00000624623 3397 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AL357078.2-201ENST00000416486 427 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 RPS15AP30-201ENST00000420976 390 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC092865.3-201ENST00000425390 1026 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 RNF19BPX-201ENST00000426224 625 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 MTND4LP7-201ENST00000431728 294 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 PSMD10P2-201ENST00000432890 672 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 CCRL1P1-201ENST00000449542 1053 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AL445687.2-201ENST00000458156 728 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 EIF2S2P4-201ENST00000461070 984 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 RN7SL352P-201ENST00000466002 277 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX2-2O95096 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.67□□□□□ -1.5
NKX2-2O95096 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.67□□□□□ -1.5
NKX2-2O95096 HMGN1P17-201ENST00000513734 295 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 TPM3P3-201ENST00000521343 354 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 TMF1P1-201ENST00000576058 373 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 GLYATL1P2-202ENST00000588046 902 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC022325.1-201ENST00000502748 2199 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.67□□□□□ -1.5
NKX2-2O95096 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 AC005225.5-201ENST00000623547 2225 ntBASIC5.67□□□□□ -1.5
NKX2-2O95096 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
NKX2-2O95096 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.67□□□□□ -1.5
NKX2-2O95096 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
NKX2-2O95096 AL356317.1-201ENST00000396110 1436 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 AC003985.2-201ENST00000562268 1669 ntBASIC5.66□□□□□ -1.5
NKX2-2O95096 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms