Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC005363.1-201ENST00000530779 351 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 TOMM20P1-201ENST00000534518 427 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 AL671309.1-201ENST00000603750 544 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 BNIP3P35-201ENST00000604530 490 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 LINC00216-201ENST00000623548 1126 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AC073488.3-201ENST00000631611 778 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 AC063952.1-203ENST00000634410 658 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.55□□□□□ -1.52
ZIC3O60481 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.55□□□□□ -1.52
ZIC3O60481 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.55□□□□□ -1.52
ZIC3O60481 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 AC022034.1-201ENST00000512867 2156 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZIC3O60481 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.55□□□□□ -1.52
ZIC3O60481 RBMY1HP-201ENST00000382759 1389 ntBASIC5.55□□□□□ -1.52
ZIC3O60481 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 AL137058.3-201ENST00000624531 3099 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 CCNT2P1-201ENST00000423082 1315 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 RNA5SP375-201ENST00000362975 119 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 RAB5CP1-201ENST00000395972 580 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AL132875.1-201ENST00000403623 949 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 SNORA77.2-201ENST00000408571 112 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 GTF3AP1-201ENST00000416942 1004 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 RPL34P27-201ENST00000428810 349 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 AL138899.2-201ENST00000439139 499 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 ZNF619P1-201ENST00000446539 752 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 AL022319.1-201ENST00000458183 1167 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC023194.2-201ENST00000465398 406 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 AL158068.1-201ENST00000506116 616 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.54□□□□□ -1.52
ZIC3O60481 RNU6-1334P-201ENST00000516032 105 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.54□□□□□ -1.52
ZIC3O60481 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 AC074029.2-201ENST00000551045 634 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 OR4H6P-201ENST00000563771 921 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC008507.3-201ENST00000585753 472 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.54□□□□□ -1.52
ZIC3O60481 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 RN7SL261P-201ENST00000613441 282 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC004801.6-201ENST00000616571 978 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AC096861.1-201ENST00000616652 240 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.54□□□□□ -1.52
ZIC3O60481 AC074276.2-201ENST00000619891 348 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 AP001885.1-201ENST00000621658 558 ntBASIC5.54□□□□□ -1.52
ZIC3O60481 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
ZIC3O60481 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
ZIC3O60481 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
ZIC3O60481 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms