Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
SOX1O00570 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
SOX1O00570 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.5□□□□□ -1.21
SOX1O00570 AP002800.1-201ENST00000624982 2225 ntBASIC7.5□□□□□ -1.21
SOX1O00570 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 CD46-209ENST00000367047 3089 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 ZNF200-201ENST00000396868 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 COX6B1P3-201ENST00000312310 260 ntBASIC7.49□□□□□ -1.21
SOX1O00570 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
SOX1O00570 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 RNU6-1283P-201ENST00000365314 105 ntBASIC7.49□□□□□ -1.21
SOX1O00570 MCTS2P-201ENST00000394552 546 ntBASIC7.49□□□□□ -1.21
SOX1O00570 HMGB1P10-201ENST00000395823 563 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AL359715.1-201ENST00000404330 555 ntBASIC7.49□□□□□ -1.21
SOX1O00570 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX1O00570 RNU2-16P-201ENST00000410712 136 ntBASIC7.49□□□□□ -1.21
SOX1O00570 OR8G2P-201ENST00000412796 908 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC007394.1-201ENST00000421941 531 ntBASIC7.49□□□□□ -1.21
SOX1O00570 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX1O00570 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 MTCO1P52-201ENST00000433928 531 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX1O00570 AP000936.2-201ENST00000447151 681 ntBASIC7.49□□□□□ -1.21
SOX1O00570 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX1O00570 RPL31P15-201ENST00000449770 338 ntBASIC7.49□□□□□ -1.21
SOX1O00570 CYCSP42-201ENST00000450823 238 ntBASIC7.49□□□□□ -1.21
SOX1O00570 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 OR52E3P-201ENST00000452083 936 ntBASIC7.49□□□□□ -1.21
SOX1O00570 HLA-DPA3-207ENST00000454398 229 ntBASIC7.49□□□□□ -1.21
SOX1O00570 SNORA81.1-201ENST00000458922 177 ntBASIC7.49□□□□□ -1.21
SOX1O00570 RN7SL254P-201ENST00000460609 284 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC7.49□□□□□ -1.21
SOX1O00570 AC092045.1-201ENST00000495716 1231 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC023050.1-201ENST00000498198 304 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 Y_RNA.695-201ENST00000516715 107 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.49□□□□□ -1.21
SOX1O00570 OR9L1P-201ENST00000529493 933 ntBASIC7.49□□□□□ -1.21
SOX1O00570 DEFB130C-202ENST00000530001 230 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 OR8G3P-201ENST00000533406 921 ntBASIC7.49□□□□□ -1.21
SOX1O00570 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 NBEAP1-201ENST00000554452 979 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 AC009955.2-201ENST00000597288 542 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AL031281.1-201ENST00000604049 488 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AP001437.1-201ENST00000608783 456 ntBASIC7.49□□□□□ -1.21
SOX1O00570 AC119674.1-201ENST00000641611 1210 ntBASIC7.49□□□□□ -1.21
SOX1O00570 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.49□□□□□ -1.21
SOX1O00570 AL359263.1-201ENST00000441188 2796 ntBASIC7.49□□□□□ -1.21
SOX1O00570 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 LINC01721-201ENST00000457274 2376 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 AKAP3-206ENST00000545990 3318 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 AC138207.6-201ENST00000579164 1967 ntBASIC7.49□□□□□ -1.21
SOX1O00570 ANAPC5-204ENST00000441917 2147 ntTSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 TRAM2-201ENST00000182527 6908 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC7.49□□□□□ -1.21
SOX1O00570 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
SOX1O00570 RECQL5-203ENST00000420326 3710 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
SOX1O00570 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 DCAF5-208ENST00000556847 2791 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 LINC00310-204ENST00000430922 2086 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX1O00570 ABLIM1-205ENST00000369266 2230 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 NHLRC3-201ENST00000379599 3275 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.48□□□□□ -1.21
SOX1O00570 AC079777.1-201ENST00000623836 1953 ntBASIC7.48□□□□□ -1.21
SOX1O00570 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 MEPE-208ENST00000540395 2135 ntAPPRIS ALT2 TSL 4 BASIC7.48□□□□□ -1.21
SOX1O00570 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 GMFG-201ENST00000253054 616 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SOX1O00570 RNA5SP242-201ENST00000364171 118 ntBASIC7.48□□□□□ -1.21
SOX1O00570 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.48□□□□□ -1.21
SOX1O00570 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms