Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 MTCO1P22-201ENST00000604619 1360 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC083837.1-201ENST00000565297 2994 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RPL11P4-201ENST00000332269 436 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RNA5SP453-201ENST00000362503 119 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RNU1-49P-201ENST00000363468 159 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 YWHAZP4-201ENST00000392459 708 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL022324.2-201ENST00000434827 780 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RPEP4-201ENST00000437636 602 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 PPIAP10-201ENST00000438675 458 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR2L9P-201ENST00000444456 913 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 POU5F1P5-201ENST00000445059 658 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 REG1CP-206ENST00000447469 496 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL445991.1-201ENST00000450381 475 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL133351.3-201ENST00000454998 193 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 MTCYBP14-201ENST00000457471 715 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RPL12P31-201ENST00000478433 450 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SNX18P24-201ENST00000505249 671 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 Y_RNA.710-201ENST00000516975 110 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC027026.1-201ENST00000532323 742 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 TDGP1-201ENST00000543961 1229 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AP005901.4-201ENST00000577336 569 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 RNU4ATAC-201ENST00000580972 127 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 MIR212-201ENST00000586026 110 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL591167.1-201ENST00000607321 456 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC022106.1-201ENST00000612834 766 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 AL133243.2-201ENST00000610331 1621 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 CASC19-246ENST00000641625 1606 ntBASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.8□□□□□ -1.48
RNF103-CHMP3A0A140T963 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC024651.2-201ENST00000562480 2098 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC020633.1-201ENST00000468439 2247 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 HSPD1P7-201ENST00000447985 1686 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 MRPS21P2-201ENST00000424704 264 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC073410.1-201ENST00000435125 589 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC108751.3-201ENST00000461814 1020 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 RN7SL393P-201ENST00000463588 296 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 RPS4XP17-201ENST00000479057 754 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC090142.2-201ENST00000483263 416 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 CR383656.1-201ENST00000484916 377 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 KHDC1P1-201ENST00000511053 508 ntBASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.79□□□□□ -1.48
RNF103-CHMP3A0A140T963 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms