Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC016583.1-201ENST00000624221 2431 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 PABPC1P8-201ENST00000452851 2086 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC093155.2-201ENST00000420734 937 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC127526.2-201ENST00000426436 775 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC244033.1-201ENST00000426826 870 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 RN7SL352P-201ENST00000466002 277 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 TPM3P3-201ENST00000521343 354 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 HMGN2P36-201ENST00000529541 409 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 OR4A40P-201ENST00000533878 948 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC010547.6-201ENST00000571789 193 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AC004477.3-201ENST00000614061 590 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 AP005212.4-201ENST00000614206 710 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 MIR193BHG-214ENST00000641765 509 ntBASIC6.26□□□□□ -1.41
YIPF1Q9Y548 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.26□□□□□ -1.41
YIPF1Q9Y548 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 SHQ1P1-201ENST00000437111 1544 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 RNA5SP211-201ENST00000365516 117 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 U3.25-201ENST00000391209 220 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 SDHDP6-201ENST00000414693 480 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AL022319.1-201ENST00000458183 1167 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 NENFP3-201ENST00000503735 313 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 GAPDHP71-201ENST00000511530 1003 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 CYCSP22-201ENST00000517555 339 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 TMEM97P2-201ENST00000517841 403 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 SNORD95-201ENST00000579879 68 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AP001496.3-201ENST00000580230 913 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC007342.9-201ENST00000623877 1385 ntBASIC6.25□□□□□ -1.41
YIPF1Q9Y548 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
YIPF1Q9Y548 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 RN7SKP166-201ENST00000410812 305 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 AK4P4-201ENST00000419465 646 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.24□□□□□ -1.41
YIPF1Q9Y548 SDC4P-201ENST00000453285 601 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 YWHAEP1-201ENST00000453697 763 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 RPS27AP2-201ENST00000457576 465 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 RPSAP39-201ENST00000467439 883 ntBASIC6.24□□□□□ -1.41
YIPF1Q9Y548 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms