Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC116158.1-201ENST00000560231 2129 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 Z82195.1-201ENST00000604558 398 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 RNU4-5P-201ENST00000607255 135 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 Six3os1_4.1-201ENST00000615706 324 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC022079.2-201ENST00000619739 566 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 Z99129.2-201ENST00000619967 314 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC078909.2-201ENST00000620584 398 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC004836.1-201ENST00000623032 634 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC136428.4-201ENST00000634254 1155 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 LCOR-201ENST00000286067 4542 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 FBXL21-201ENST00000297158 1305 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC012078.1-201ENST00000405035 1646 ntBASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.42□□□□□ -1.38
CCM2LQ9NUG4 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC068769.1-201ENST00000474767 2426 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AL161901.1-201ENST00000624954 3425 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 FAM32BP-201ENST00000344033 333 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RNA5SP188-201ENST00000362916 129 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AL672167.2-201ENST00000377164 879 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 CHMP1B2P-201ENST00000399581 597 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 EEF1GP6-201ENST00000402309 905 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 MTND1P31-201ENST00000449206 961 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 HMGB1P5-202ENST00000451497 985 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RN7SL382P-201ENST00000482631 282 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RN7SL849P-201ENST00000485236 295 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC107398.1-201ENST00000486904 505 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RNU6-311P-201ENST00000516224 102 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RN7SKP248-201ENST00000516278 305 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 VN1R87P-201ENST00000596706 487 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC008115.4-201ENST00000619780 775 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 AC012254.5-201ENST00000623573 478 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 OR8G3P-202ENST00000641572 1255 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 MTND5P23-201ENST00000430812 1655 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CCM2LQ9NUG4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.4□□□□□ -1.38
CCM2LQ9NUG4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms