Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC129778.1-202ENST00000623812 261 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AC090506.2-201ENST00000624521 419 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL591379.1-207ENST00000635982 261 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL445984.1-201ENST00000637834 659 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC7.14□□□□□ -1.27
VTA1Q9NP79 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 AL133243.4-201ENST00000623116 3109 ntBASIC7.14□□□□□ -1.27
VTA1Q9NP79 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
VTA1Q9NP79 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 MTCO1P4-201ENST00000520516 1409 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 SSX3-202ENST00000376893 800 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 IPPKP1-201ENST00000422501 768 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 RPS7P14-201ENST00000426405 583 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 CLIC4P1-201ENST00000453177 535 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 OR2AF1P-201ENST00000454899 889 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC098847.1-201ENST00000473094 348 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC108729.2-201ENST00000476543 840 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC135999.1-201ENST00000478962 479 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 FABP5P6-201ENST00000510588 409 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC110760.3-202ENST00000515177 371 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC112198.4-201ENST00000515450 351 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC016550.3-201ENST00000515706 767 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC060775.1-201ENST00000518241 520 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 OR1AB1P-201ENST00000585564 761 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 MIR7159-201ENST00000620587 66 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC026124.2-201ENST00000621847 656 ntBASIC7.13□□□□□ -1.27
VTA1Q9NP79 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
VTA1Q9NP79 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC7.13□□□□□ -1.27
VTA1Q9NP79 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 EIF3EP1-201ENST00000433978 1316 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
VTA1Q9NP79 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 MTND2P21-201ENST00000436242 1042 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 AC023141.3-201ENST00000436698 278 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 ATP5LP2-201ENST00000440646 311 ntBASIC7.12□□□□□ -1.27
VTA1Q9NP79 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.12□□□□□ -1.27
VTA1Q9NP79 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms