Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC079148.1-201ENST00000565944 819 ntBASIC6.88□□□□□ -1.31
CD248Q9HCU0 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC025283.1-201ENST00000572039 734 ntBASIC6.88□□□□□ -1.31
CD248Q9HCU0 MIR4271-201ENST00000582451 67 ntBASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC091193.1-201ENST00000604640 448 ntBASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC009090.3-201ENST00000616553 565 ntBASIC6.88□□□□□ -1.31
CD248Q9HCU0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CD248Q9HCU0 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD248Q9HCU0 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD248Q9HCU0 INTS7-203ENST00000366994 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CD248Q9HCU0 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.88□□□□□ -1.31
CD248Q9HCU0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL390862.1-201ENST00000635467 1469 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 SNORA70.3-201ENST00000365075 132 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 PTGES3P2-201ENST00000407942 482 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 TMA16P2-201ENST00000413187 601 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL359885.1-201ENST00000415786 903 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 TIMM8BP2-201ENST00000445940 251 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC068491.1-201ENST00000449539 1241 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL034399.1-201ENST00000451535 380 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 MTND2P30-201ENST00000456663 382 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 SNX18P23-201ENST00000510867 677 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC113192.3-201ENST00000529152 742 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC016144.1-201ENST00000548175 1087 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC015726.1-201ENST00000602353 681 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC091133.5-201ENST00000603088 301 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 MTATP6P2-201ENST00000603319 678 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC009237.12-201ENST00000604755 742 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AL121652.1-201ENST00000608851 448 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 MIR7109-201ENST00000613748 65 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC008121.2-201ENST00000614647 523 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC012676.3-201ENST00000614983 479 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AP003497.2-201ENST00000624220 967 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC111152.1-202ENST00000635848 339 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC006511.3-201ENST00000624929 1783 ntBASIC6.87□□□□□ -1.31
CD248Q9HCU0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.87□□□□□ -1.31
CD248Q9HCU0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD248Q9HCU0 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CD248Q9HCU0 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD248Q9HCU0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 AL645568.2-201ENST00000432815 1337 ntBASIC6.86□□□□□ -1.31
CD248Q9HCU0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD248Q9HCU0 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
CD248Q9HCU0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.86□□□□□ -1.31
CD248Q9HCU0 RN7SKP62-201ENST00000384539 329 ntBASIC6.86□□□□□ -1.31
CD248Q9HCU0 RNA5SP474-201ENST00000391234 90 ntBASIC6.86□□□□□ -1.31
CD248Q9HCU0 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms