Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL391361.1-201ENST00000405580 489 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC116036.1-201ENST00000412199 367 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AK4P4-201ENST00000419465 646 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC002504.1-201ENST00000438281 691 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC073610.1-201ENST00000489971 396 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 COX6CP7-201ENST00000597056 208 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FAM27E4-201ENST00000605259 342 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 AC116667.2-201ENST00000641075 823 ntBASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KIAA1549Q9HCM3 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AL662795.2-201ENST00000624252 3706 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC015689.2-201ENST00000528172 1738 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CCAT2-201ENST00000630920 1752 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 SNORA51.1-201ENST00000363243 140 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 SNORA70.9-201ENST00000384370 135 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 MIR3176-201ENST00000582210 90 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC009237.12-201ENST00000604755 742 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AL353729.2-201ENST00000605859 1249 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL544P-201ENST00000617232 284 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC245014.3-201ENST00000618589 347 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 RN7SL763P-201ENST00000620922 284 ntBASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KIAA1549Q9HCM3 AC130304.1-201ENST00000622942 2385 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 MIR130A-201ENST00000385274 89 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 RN7SKP29-201ENST00000410957 272 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC126120.1-201ENST00000431082 470 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC064862.4-201ENST00000442180 334 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 RNU1-88P-201ENST00000459274 128 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 HMGN2P36-201ENST00000529541 409 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 PCNAP4-201ENST00000532690 730 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC011445.2-201ENST00000599274 173 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 RN7SL787P-201ENST00000613000 284 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 AC004477.3-201ENST00000614061 590 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 NBPF8-201ENST00000583271 5330 ntBASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KIAA1549Q9HCM3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms