Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ANKRD54P1-201ENST00000433115 471 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AC073358.1-201ENST00000505671 684 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AC063977.5-201ENST00000601044 974 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 TAS2R6P-201ENST00000605022 826 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 GLULP6-201ENST00000399502 913 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 DUTP5-201ENST00000406790 469 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 KRTAP3-4P-201ENST00000430780 280 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
CHD8Q9HCK8 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CHD8Q9HCK8 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AL122126.1-201ENST00000546905 1318 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RNU1-46P-201ENST00000384425 164 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AL133482.1-201ENST00000415988 498 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RPL7L1P8-201ENST00000469911 741 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 PPATP2-201ENST00000605635 508 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 ASNSP1-204ENST00000641977 1664 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 LINC01963-201ENST00000562038 3148 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 COL6A4P1-202ENST00000487147 4317 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RNA5SP305-201ENST00000362665 119 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AL034399.1-201ENST00000451535 380 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 RPEP1-201ENST00000504507 658 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 NMNAT1P5-201ENST00000559657 841 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AL118522.2-201ENST00000616045 615 ntBASIC5.51□□□□□ -1.53
CHD8Q9HCK8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 ABCC2-202ENST00000370449 5312 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 MR1-205ENST00000434571 7479 ntTSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
CHD8Q9HCK8 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 CHMP1B2P-201ENST00000399581 597 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 MRPL53P1-201ENST00000414323 319 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AC092570.3-201ENST00000420113 693 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CHD8Q9HCK8 AL359073.1-201ENST00000448036 403 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 RPL23AP68-201ENST00000480924 445 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 OR4A6P-201ENST00000534364 970 ntBASIC5.5□□□□□ -1.53
CHD8Q9HCK8 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms