Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC025470.1-201ENST00000510053 2032 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC104966.1-201ENST00000467010 1464 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC018717.1-201ENST00000457712 1505 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC004076.2-201ENST00000620532 3323 ntBASIC6.14□□□□□ -1.43
C9orf72Q96LT7 AC119674.1-202ENST00000641333 1860 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AL591135.1-201ENST00000401578 5914 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 RNU11-201ENST00000387069 134 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 RPS15AP30-201ENST00000420976 390 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 RPS10P18-201ENST00000442662 495 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 OR52I1-201ENST00000450052 1050 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 RPL12P30-201ENST00000488389 499 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AC036111.2-201ENST00000533247 901 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 NDUFA5P11-201ENST00000567995 343 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AL360012.1-201ENST00000602813 131 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 SNX18P12-201ENST00000624821 759 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AC011933.2-201ENST00000578539 2790 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 WDR95P-201ENST00000425638 1542 ntBASIC6.13□□□□□ -1.43
C9orf72Q96LT7 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
C9orf72Q96LT7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC123769.1-201ENST00000530992 3192 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 RN7SKP240-201ENST00000410583 375 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC115283.1-201ENST00000427353 400 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 RPL12P11-201ENST00000439970 501 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 SDC4P-201ENST00000453285 601 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 RN7SL284P-201ENST00000498823 275 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC095052.1-201ENST00000509955 863 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC136777.2-201ENST00000522979 358 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC119403.2-201ENST00000590960 598 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AC025857.2-201ENST00000602711 238 ntBASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.12□□□□□ -1.43
C9orf72Q96LT7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms