Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC093166.4-201ENST00000457867 318 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC091965.3-201ENST00000506236 208 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AP000662.1-201ENST00000530952 487 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 RBM22P12-201ENST00000567098 1255 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC063977.5-201ENST00000601044 974 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 AL359704.2-201ENST00000604335 521 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC133644.2-201ENST00000608142 540 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC168Q8NDH2 AC062022.1-201ENST00000451026 1684 ntBASIC5□□□□□ -1.61
CCDC168Q8NDH2 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC168Q8NDH2 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 APP-206ENST00000359726 3294 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RPL17P50-201ENST00000396131 546 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CYCSP12-201ENST00000437729 300 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL389915.2-201ENST00000454576 441 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RN7SL738P-201ENST00000470264 297 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 SNORA43.3-201ENST00000517240 103 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC079075.1-201ENST00000559543 878 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 TXNP4-201ENST00000575018 310 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC008115.3-201ENST00000614874 549 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC091953.3-201ENST00000623220 236 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 MAPK10-350ENST00000641777 965 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 OPALIN-203ENST00000393871 3545 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 ARHGAP42P5-201ENST00000548856 2936 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 FO393409.1-201ENST00000399325 1372 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC126120.1-201ENST00000431082 470 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC009237.1-201ENST00000442127 744 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CEACAMP9-201ENST00000442990 513 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL139156.3-201ENST00000454802 394 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL157777.1-201ENST00000468100 304 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AP000676.2-201ENST00000529711 301 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 RPA2P3-201ENST00000533268 770 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL110118.1-201ENST00000553543 400 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 GTF2IP6-201ENST00000583143 541 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AC027229.1-201ENST00000583887 253 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 AL137067.2-201ENST00000621202 131 ntBASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 CREM-208ENST00000361599 2170 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC168Q8NDH2 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms