Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 CR788268.1-201ENST00000603931 1809 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC083837.1-201ENST00000565297 2994 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AL451142.1-201ENST00000375867 775 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 SNORA70.9-201ENST00000384370 135 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PRELID1P1-201ENST00000403549 660 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 RN7SKP278-201ENST00000410504 342 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 CDY17P-201ENST00000414121 1282 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PTP4A1P1-201ENST00000420539 515 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 RPS7P12-201ENST00000422385 582 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 CDY8P-201ENST00000428380 1279 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 VN1R53P-201ENST00000429536 957 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 GAPDHP59-201ENST00000435908 267 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 CDY20P-201ENST00000447528 1279 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 RPL23AP28-201ENST00000448062 470 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 TPRKBP1-201ENST00000456243 481 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AL096803.1-201ENST00000456921 1021 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC026348.1-201ENST00000462549 1053 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC092593.2-201ENST00000513866 913 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 MTCYBP44-201ENST00000514835 823 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AP001804.1-201ENST00000526868 919 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC090115.2-201ENST00000548060 883 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC063977.7-201ENST00000594454 337 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC067773.1-201ENST00000603284 1094 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC007620.3-201ENST00000608131 497 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AP005131.7-201ENST00000610087 611 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AL137246.2-201ENST00000613439 662 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 MIR6826-201ENST00000617808 98 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AC114546.4-201ENST00000624413 369 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 AL163152.1-201ENST00000642001 374 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 LINC01613-201ENST00000561476 2780 ntBASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PDLIM3Q53GG5 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC092701.1-201ENST00000623627 1551 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RGS5-202ENST00000367903 934 ntTSL 3 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 FDPSP5-201ENST00000399474 1057 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 RPL23AP18-201ENST00000416139 468 ntBASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.31□□□□□ -1.56
PDLIM3Q53GG5 OR5W1P-201ENST00000423705 938 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms