Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CCDC38Q502W7 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.52□□□□□ -1.37
CCDC38Q502W7 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC010132.2-201ENST00000295493 1043 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 Y_RNA.110-201ENST00000363220 99 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 OR6K3-202ENST00000368146 996 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 SNORD65-201ENST00000391079 73 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC019178.1-201ENST00000392337 440 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AP003385.1-201ENST00000426387 893 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 DSTNP5-201ENST00000427921 523 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 RPL17P35-201ENST00000432217 549 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL353718.1-201ENST00000451028 517 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL022319.1-201ENST00000458183 1167 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 RN7SL221P-201ENST00000466190 281 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 RN7SL790P-201ENST00000474043 298 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 RPL5P33-201ENST00000487833 905 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC106800.3-201ENST00000511389 308 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC067904.2-201ENST00000517322 1283 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 CHEK2P2-201ENST00000554701 672 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 MTND2P13-201ENST00000577438 1039 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC005726.4-201ENST00000582858 458 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 RNA5SP439-201ENST00000617595 124 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL109620.1-201ENST00000618738 1197 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL355834.1-201ENST00000556602 3965 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 AL355488.2-201ENST00000609909 2850 ntBASIC6.51□□□□□ -1.37
CCDC38Q502W7 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CCDC38Q502W7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AOX3P-204ENST00000491025 2107 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC026310.1-201ENST00000396004 378 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL391419.1-201ENST00000398901 1275 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 RNA5SP155-201ENST00000411154 129 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC093870.1-201ENST00000506837 213 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC093664.1-201ENST00000511779 289 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 SNORA26.10-201ENST00000516427 141 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 OR9G2P-201ENST00000533326 880 ntBASIC6.5□□□□□ -1.37
CCDC38Q502W7 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC6.5□□□□□ -1.37
CCDC38Q502W7 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms