Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.61□□□□□ -1.19
CCDC144BQ3MJ40 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL359195.2-201ENST00000623657 4412 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 RNU1-55P-201ENST00000365510 158 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 TRBV26OR9-2-201ENST00000432077 293 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 RPS27P5-201ENST00000444247 244 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 RPS17P11-201ENST00000474297 293 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC010460.2-201ENST00000509054 677 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 UGT2A3P7-201ENST00000510485 734 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC011352.2-201ENST00000514574 1016 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC084121.1-201ENST00000533882 835 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 RN7SL339P-201ENST00000580597 296 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 SNORD96A-201ENST00000606577 79 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL050303.3-201ENST00000613704 284 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC026951.2-201ENST00000613847 241 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MIR6861-201ENST00000618657 64 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MIR7854-201ENST00000620068 65 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 RPL23AP61-201ENST00000623642 466 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AC096992.2-201ENST00000609553 1684 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 AL355377.1-201ENST00000621125 1653 ntBASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CCDC144BQ3MJ40 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 RNA5SP485-201ENST00000365053 119 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 OR7E156P-201ENST00000400303 464 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 HMGB3P19-201ENST00000403971 560 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL355615.1-201ENST00000406187 641 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL360013.1-201ENST00000419031 858 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC079807.1-201ENST00000429993 481 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 RPS10P18-201ENST00000442662 495 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC092106.1-201ENST00000444291 373 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 RARRES2P3-201ENST00000457739 473 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 H3F3AP5-201ENST00000475267 429 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 OR5H3P-201ENST00000502817 919 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC010476.1-201ENST00000519111 851 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC084759.1-201ENST00000561168 290 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC104229.1-201ENST00000561364 255 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 NDUFA5P11-201ENST00000567995 343 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AC245052.7-201ENST00000601161 359 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL589743.6-201ENST00000611025 117 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 RNU6-1192P-201ENST00000612197 107 ntBASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.59□□□□□ -1.19
CCDC144BQ3MJ40 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms