Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 CBX1P2-201ENST00000453841 458 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 RPL38P3-201ENST00000484463 213 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC004453.1-201ENST00000487895 408 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 RNA5SP228-201ENST00000516232 133 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 OR4A40P-201ENST00000533878 948 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.17□□□□□ -1.1
PTCH1Q13635 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AC015720.2-201ENST00000567709 334 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AL445222.1-201ENST00000607259 628 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AL049539.1-201ENST00000611964 459 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 AC023421.1-201ENST00000590535 1785 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
PTCH1Q13635 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.17□□□□□ -1.1
PTCH1Q13635 FTO-215ENST00000636491 1676 ntTSL 5 BASIC8.17□□□□□ -1.1
PTCH1Q13635 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
PTCH1Q13635 AC114786.1-201ENST00000512892 1415 ntBASIC8.17□□□□□ -1.1
PTCH1Q13635 CD86-204ENST00000469710 1604 ntTSL 2 BASIC8.16□□□□□ -1.1
PTCH1Q13635 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC8.16□□□□□ -1.1
PTCH1Q13635 AC105749.1-201ENST00000631338 2008 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
PTCH1Q13635 AC087516.1-201ENST00000561236 2428 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 AC007938.2-201ENST00000604666 2634 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC8.16□□□□□ -1.1
PTCH1Q13635 AC022034.1-201ENST00000512867 2156 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 AL159987.1-201ENST00000347911 293 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PTCH1Q13635 METTL15P3-201ENST00000415522 1221 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC8.16□□□□□ -1.1
PTCH1Q13635 RPL35AP28-201ENST00000459730 331 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC8.16□□□□□ -1.1
PTCH1Q13635 MIR4260-201ENST00000583107 67 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 AP002884.5-201ENST00000595053 1132 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 TCL6_3.1-201ENST00000619064 137 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 MIR6837-201ENST00000620884 64 ntBASIC8.16□□□□□ -1.1
PTCH1Q13635 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.16□□□□□ -1.1
PTCH1Q13635 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC8.16□□□□□ -1.1
PTCH1Q13635 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.16□□□□□ -1.1
PTCH1Q13635 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
PTCH1Q13635 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
PTCH1Q13635 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC8.16□□□□□ -1.1
PTCH1Q13635 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PTCH1Q13635 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PTCH1Q13635 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 CYP4Z2P-201ENST00000423332 1512 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC8.15□□□□□ -1.1
PTCH1Q13635 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC8.15□□□□□ -1.1
PTCH1Q13635 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
PTCH1Q13635 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 U3.2-201ENST00000362981 210 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 RN7SKP279-201ENST00000411383 298 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 MYL6P5-201ENST00000412707 459 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC8.15□□□□□ -1.1
PTCH1Q13635 AC015983.1-201ENST00000441577 373 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AL450023.1-201ENST00000450868 751 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AL355032.1-201ENST00000472981 438 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 RPL32P33-201ENST00000487023 394 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AC073610.1-201ENST00000489971 396 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC8.15□□□□□ -1.1
PTCH1Q13635 RN7SL708P-201ENST00000580952 299 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AC104785.1-201ENST00000603220 588 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 AL139407.1-201ENST00000613826 1175 ntBASIC8.15□□□□□ -1.1
PTCH1Q13635 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC8.15□□□□□ -1.1
PTCH1Q13635 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
PTCH1Q13635 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
PTCH1Q13635 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
PTCH1Q13635 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC8.15□□□□□ -1.1
PTCH1Q13635 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
PTCH1Q13635 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
PTCH1Q13635 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC8.15□□□□□ -1.11
PTCH1Q13635 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTCH1Q13635 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC8.15□□□□□ -1.11
PTCH1Q13635 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTCH1Q13635 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTCH1Q13635 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
PTCH1Q13635 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.14□□□□□ -1.11
PTCH1Q13635 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
PTCH1Q13635 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms