Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 ING3-204ENST00000431467 1447 ntTSL 2 BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HIST1H1AQ02539 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AL353796.1-201ENST00000561542 3241 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 RPS2P45-201ENST00000469997 2057 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 RN7SKP121-201ENST00000410842 305 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 RN7SKP144-201ENST00000411108 279 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AL445213.1-201ENST00000412589 747 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 DHFRP2-201ENST00000414224 547 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 RPS7P8-201ENST00000418311 581 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 PA2G4P1-201ENST00000442248 1197 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC245291.3-201ENST00000443400 292 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 POU5F1P5-201ENST00000445059 658 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 OR4D12P-201ENST00000509361 911 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 OR8Q1P-201ENST00000526467 655 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 OR4A43P-201ENST00000532938 908 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 TDGP1-201ENST00000543961 1229 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 RPL41P2-201ENST00000544920 409 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AL049779.3-201ENST00000557141 606 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC026898.1-201ENST00000586404 571 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC068726.1-201ENST00000610993 341 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC010998.3-201ENST00000613871 631 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AC069542.2-201ENST00000624816 216 ntBASIC4.62□□□□□ -1.67
HIST1H1AQ02539 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HIST1H1AQ02539 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC019072.1-201ENST00000604535 1551 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 CASC19-246ENST00000641625 1606 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 RNU1-49P-201ENST00000363468 159 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 SNORA64.3-201ENST00000365647 134 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL354707.3-201ENST00000427308 331 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 PPIAP10-201ENST00000438675 458 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC092601.1-201ENST00000444526 383 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 GAPDHP23-201ENST00000444823 993 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC234771.2-201ENST00000445718 597 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 GAPDHP14-201ENST00000450472 937 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC124945.1-201ENST00000485133 188 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 RNA5SP206-201ENST00000516703 121 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 IGHVIII-11-1-201ENST00000522733 267 ntBASIC4.61□□□□□ -1.67
HIST1H1AQ02539 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.61□□□□□ -1.67
HIST1H1AQ02539 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms