Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 AC016739.1-201ENST00000405359 345 ntBASIC6.13□□□□□ -1.43
CDH4P55283 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH4P55283 AC099677.3-201ENST00000427081 395 ntBASIC6.13□□□□□ -1.43
CDH4P55283 KCTD9P1-201ENST00000430462 1167 ntBASIC6.13□□□□□ -1.43
CDH4P55283 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 CUBNP2-201ENST00000443534 1139 ntBASIC6.13□□□□□ -1.43
CDH4P55283 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 ACA64.4-201ENST00000459070 127 ntBASIC6.13□□□□□ -1.43
CDH4P55283 AL122020.1-201ENST00000472287 459 ntBASIC6.13□□□□□ -1.43
CDH4P55283 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 OR4A42P-201ENST00000531397 938 ntBASIC6.13□□□□□ -1.43
CDH4P55283 NANOGNBP2-201ENST00000544753 553 ntBASIC6.13□□□□□ -1.43
CDH4P55283 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH4P55283 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6.13□□□□□ -1.43
CDH4P55283 AL096712.1-201ENST00000614561 159 ntBASIC6.13□□□□□ -1.43
CDH4P55283 AL359742.1-201ENST00000622497 540 ntBASIC6.13□□□□□ -1.43
CDH4P55283 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.13□□□□□ -1.43
CDH4P55283 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.13□□□□□ -1.43
CDH4P55283 AC027088.4-201ENST00000611559 1947 ntBASIC6.13□□□□□ -1.43
CDH4P55283 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CDH4P55283 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 RN7SKP128-201ENST00000364270 303 ntBASIC6.12□□□□□ -1.43
CDH4P55283 RNA5SP211-201ENST00000365516 117 ntBASIC6.12□□□□□ -1.43
CDH4P55283 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 AL354890.1-201ENST00000413730 346 ntBASIC6.12□□□□□ -1.43
CDH4P55283 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH4P55283 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH4P55283 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH4P55283 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH4P55283 AL590399.4-201ENST00000436561 601 ntBASIC6.12□□□□□ -1.43
CDH4P55283 NDUFS5P5-201ENST00000437256 321 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH4P55283 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 ACA64.1-201ENST00000459171 127 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AL355032.1-201ENST00000472981 438 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AC114876.1-201ENST00000490962 1366 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH4P55283 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.12□□□□□ -1.43
CDH4P55283 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 OR7E158P-201ENST00000524483 910 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AP003080.1-202ENST00000526526 915 ntBASIC6.12□□□□□ -1.43
CDH4P55283 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH4P55283 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH4P55283 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH4P55283 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.12□□□□□ -1.43
CDH4P55283 MIR6861-201ENST00000618657 64 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AL355377.1-201ENST00000621125 1653 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AL162377.2-201ENST00000624532 337 ntBASIC6.12□□□□□ -1.43
CDH4P55283 AC129915.3-201ENST00000634128 948 ntBASIC6.12□□□□□ -1.43
CDH4P55283 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CDH4P55283 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.12□□□□□ -1.43
CDH4P55283 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CDH4P55283 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.11□□□□□ -1.43
CDH4P55283 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDH4P55283 OR7E25P-201ENST00000344844 931 ntBASIC6.11□□□□□ -1.43
CDH4P55283 AC023490.2-201ENST00000359859 470 ntBASIC6.11□□□□□ -1.43
CDH4P55283 FIG4-202ENST00000368941 791 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 AL121835.1-201ENST00000404250 354 ntBASIC6.11□□□□□ -1.43
CDH4P55283 HMGN1P20-201ENST00000411849 300 ntBASIC6.11□□□□□ -1.43
CDH4P55283 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.11□□□□□ -1.43
CDH4P55283 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.11□□□□□ -1.43
CDH4P55283 AL445687.2-201ENST00000458156 728 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms