Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 RN7SKP126-201ENST00000411143 300 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 MORF4L1P5-201ENST00000433352 961 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 RPL7P11-201ENST00000437586 658 ntBASIC6.16□□□□□ -1.42
BRCA2P51587 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 MED12-201ENST00000333646 6977 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
BRCA2P51587 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 SNRNP200-201ENST00000323853 7165 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
BRCA2P51587 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.16□□□□□ -1.42
BRCA2P51587 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 AC091046.3-201ENST00000631455 1574 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC6.15□□□□□ -1.42
BRCA2P51587 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.15□□□□□ -1.42
BRCA2P51587 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 snoU13.20-201ENST00000459180 104 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.15□□□□□ -1.42
BRCA2P51587 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.15□□□□□ -1.42
BRCA2P51587 AC109635.6-201ENST00000525487 1113 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC6.15□□□□□ -1.42
BRCA2P51587 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
BRCA2P51587 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 AC092070.2-203ENST00000598377 3644 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 SNORA11F-201ENST00000408237 128 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.15□□□□□ -1.42
BRCA2P51587 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.15□□□□□ -1.42
BRCA2P51587 AC092570.3-201ENST00000420113 693 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
BRCA2P51587 RPL23AP72-201ENST00000492447 435 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.15□□□□□ -1.42
BRCA2P51587 MIR4277-201ENST00000578298 84 ntBASIC6.15□□□□□ -1.42
BRCA2P51587 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 UGT2B27P-201ENST00000505092 1620 ntBASIC6.15□□□□□ -1.43
BRCA2P51587 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.15□□□□□ -1.43
BRCA2P51587 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.15□□□□□ -1.43
BRCA2P51587 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.15□□□□□ -1.43
BRCA2P51587 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.15□□□□□ -1.43
BRCA2P51587 AC026402.1-201ENST00000513642 170 ntBASIC6.15□□□□□ -1.43
BRCA2P51587 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BRCA2P51587 SLC30A8-201ENST00000427715 5430 ntTSL 2 BASIC6.15□□□□□ -1.43
BRCA2P51587 ERG-201ENST00000288319 4919 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCA2P51587 ZRANB2-AS1-202ENST00000450461 553 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 AC139697.1-201ENST00000548429 745 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 BGLT3-201ENST00000564523 994 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.14□□□□□ -1.43
BRCA2P51587 MIR92B-201ENST00000607575 96 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 HTR2A-201ENST00000378688 4835 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 COL6A4P1-202ENST00000487147 4317 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 INTS6P1-201ENST00000504674 2530 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
BRCA2P51587 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCA2P51587 RN7SKP6-201ENST00000364795 319 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.14□□□□□ -1.43
BRCA2P51587 FTH1P8-201ENST00000498161 514 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.14□□□□□ -1.43
BRCA2P51587 AL034549.2-201ENST00000618285 3373 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 ZNF733P-202ENST00000444809 1573 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 AC016251.2-201ENST00000623393 3089 ntBASIC6.14□□□□□ -1.43
BRCA2P51587 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BRCA2P51587 ZNF658B-201ENST00000602828 3408 ntBASIC6.13□□□□□ -1.43
BRCA2P51587 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.13□□□□□ -1.43
BRCA2P51587 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.13□□□□□ -1.43
BRCA2P51587 AC091390.2-201ENST00000432573 374 ntBASIC6.13□□□□□ -1.43
BRCA2P51587 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.13□□□□□ -1.43
BRCA2P51587 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC6.13□□□□□ -1.43
BRCA2P51587 AC103792.1-201ENST00000603591 919 ntBASIC6.13□□□□□ -1.43
BRCA2P51587 AL161616.1-201ENST00000611867 286 ntBASIC6.13□□□□□ -1.43
BRCA2P51587 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BRCA2P51587 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BRCA2P51587 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 270.4 ms