Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 UGP2-231ENST00000627474 264 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
ERCC3P19447 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 VN2R3P-201ENST00000422626 1412 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 OFD1P8Y-201ENST00000449148 1433 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
ERCC3P19447 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
ERCC3P19447 AC130360.2-201ENST00000533477 1556 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 DDX18P6-201ENST00000450119 1997 ntBASIC8.01□□□□□ -1.13
ERCC3P19447 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
ERCC3P19447 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 AC245100.2-201ENST00000454544 1679 ntBASIC8□□□□□ -1.13
ERCC3P19447 AC017079.1-201ENST00000333650 415 ntBASIC8□□□□□ -1.13
ERCC3P19447 ANKRD36P1-201ENST00000344424 659 ntBASIC8□□□□□ -1.13
ERCC3P19447 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC8□□□□□ -1.13
ERCC3P19447 RNA5SP308-201ENST00000362532 115 ntBASIC8□□□□□ -1.13
ERCC3P19447 RN7SKP187-201ENST00000365536 330 ntBASIC8□□□□□ -1.13
ERCC3P19447 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 RNU6-1242P-201ENST00000391052 103 ntBASIC8□□□□□ -1.13
ERCC3P19447 RPL24P7-201ENST00000399435 453 ntBASIC8□□□□□ -1.13
ERCC3P19447 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 AL133260.1-201ENST00000405720 405 ntBASIC8□□□□□ -1.13
ERCC3P19447 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 LINC01347-201ENST00000417964 355 ntBASIC8□□□□□ -1.13
ERCC3P19447 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 SDHCP3-201ENST00000445371 506 ntBASIC8□□□□□ -1.13
ERCC3P19447 AC068135.1-201ENST00000446164 246 ntBASIC8□□□□□ -1.13
ERCC3P19447 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 HNRNPDLP3-201ENST00000456745 380 ntBASIC8□□□□□ -1.13
ERCC3P19447 MARK2P8-201ENST00000476069 952 ntBASIC8□□□□□ -1.13
ERCC3P19447 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 AP000563.1-201ENST00000490865 758 ntBASIC8□□□□□ -1.13
ERCC3P19447 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 APOBEC3AP1-201ENST00000511396 287 ntBASIC8□□□□□ -1.13
ERCC3P19447 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 AC010442.1-201ENST00000515583 816 ntBASIC8□□□□□ -1.13
ERCC3P19447 RNA5SP473-201ENST00000516402 125 ntBASIC8□□□□□ -1.13
ERCC3P19447 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 SAA3P-201ENST00000533267 365 ntBASIC8□□□□□ -1.13
ERCC3P19447 ASB8-203ENST00000535988 679 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 ASB8-215ENST00000540782 659 ntTSL 3 BASIC8□□□□□ -1.13
ERCC3P19447 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC8□□□□□ -1.13
ERCC3P19447 DUX4L52-201ENST00000549363 777 ntBASIC8□□□□□ -1.13
ERCC3P19447 ZNF321P-202ENST00000550843 495 ntBASIC8□□□□□ -1.13
ERCC3P19447 CCL2-202ENST00000580907 736 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 AC107952.2-201ENST00000606048 486 ntBASIC8□□□□□ -1.13
ERCC3P19447 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 AL162377.2-201ENST00000624532 337 ntBASIC8□□□□□ -1.13
ERCC3P19447 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 AL161901.1-201ENST00000624954 3425 ntBASIC8□□□□□ -1.13
ERCC3P19447 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 AP000866.6-201ENST00000638898 3579 ntBASIC8□□□□□ -1.13
ERCC3P19447 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8□□□□□ -1.13
ERCC3P19447 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC8□□□□□ -1.13
ERCC3P19447 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC8□□□□□ -1.13
ERCC3P19447 AC016251.2-201ENST00000623393 3089 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 SPATA2P1-201ENST00000431223 2055 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC7.99□□□□□ -1.13
ERCC3P19447 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
ERCC3P19447 MTND4P10-201ENST00000446199 1363 ntBASIC7.99□□□□□ -1.13
ERCC3P19447 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
ERCC3P19447 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.99□□□□□ -1.13
ERCC3P19447 AC127070.3-201ENST00000503695 3263 ntBASIC7.99□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms