Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX3O60493 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SNX3O60493 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 AL139100.1-201ENST00000408001 498 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AL096829.1-201ENST00000413677 457 ntBASIC5.77□□□□□ -1.49
SNX3O60493 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 CDC42P6-201ENST00000421246 576 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 FAM177B-204ENST00000445590 1096 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 AC104164.1-201ENST00000460282 590 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 RN7SL70P-201ENST00000478322 302 ntBASIC5.77□□□□□ -1.49
SNX3O60493 CCNHP1-201ENST00000513311 678 ntBASIC5.77□□□□□ -1.49
SNX3O60493 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 AC110056.1-201ENST00000525759 911 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX3O60493 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 EIF1AXP2-201ENST00000555940 413 ntBASIC5.77□□□□□ -1.49
SNX3O60493 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 AP000919.1-201ENST00000582850 985 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AC107993.1-201ENST00000591343 684 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AC073389.3-201ENST00000609434 935 ntBASIC5.77□□□□□ -1.49
SNX3O60493 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.77□□□□□ -1.49
SNX3O60493 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 MTCO1P8-201ENST00000416914 1523 ntBASIC5.77□□□□□ -1.49
SNX3O60493 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.77□□□□□ -1.49
SNX3O60493 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.77□□□□□ -1.49
SNX3O60493 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SNX3O60493 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
SNX3O60493 AC100810.3-201ENST00000633189 2240 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.76□□□□□ -1.49
SNX3O60493 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNX3O60493 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.76□□□□□ -1.49
SNX3O60493 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.76□□□□□ -1.49
SNX3O60493 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.76□□□□□ -1.49
SNX3O60493 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 VN1R21P-201ENST00000426703 765 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC099677.3-201ENST00000427081 395 ntBASIC5.76□□□□□ -1.49
SNX3O60493 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 AK3P5-201ENST00000432033 519 ntBASIC5.76□□□□□ -1.49
SNX3O60493 RPS12P17-201ENST00000438591 377 ntBASIC5.76□□□□□ -1.49
SNX3O60493 LINC02210-201ENST00000444561 288 ntBASIC5.76□□□□□ -1.49
SNX3O60493 SLAMF6P1-201ENST00000451067 602 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 RPS17P5-201ENST00000498293 408 ntBASIC5.76□□□□□ -1.49
SNX3O60493 RN7SL104P-201ENST00000498686 293 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 OR56A7P-201ENST00000524865 941 ntBASIC5.76□□□□□ -1.49
SNX3O60493 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 OR4A42P-201ENST00000531397 938 ntBASIC5.76□□□□□ -1.49
SNX3O60493 NF1P12-201ENST00000549593 583 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.76□□□□□ -1.49
SNX3O60493 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.76□□□□□ -1.49
SNX3O60493 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNX3O60493 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
SNX3O60493 AF186192.2-204ENST00000581667 524 ntBASIC5.76□□□□□ -1.49
SNX3O60493 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 uc_338.33-201ENST00000614988 170 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC096861.1-201ENST00000616652 240 ntBASIC5.76□□□□□ -1.49
SNX3O60493 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.76□□□□□ -1.49
SNX3O60493 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 MTCO1P22-201ENST00000604619 1360 ntBASIC5.76□□□□□ -1.49
SNX3O60493 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SNX3O60493 OR5M2P-202ENST00000641241 4242 ntBASIC5.76□□□□□ -1.49
SNX3O60493 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms