Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 VN1R34P-201ENST00000447387 883 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 XKRYP5-201ENST00000449659 483 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ZNF114P1-201ENST00000453500 292 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 UOX-201ENST00000471089 899 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AL024509.2-201ENST00000493462 493 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 UGT2A3P7-201ENST00000510485 734 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 GTF2F2P1-201ENST00000511083 675 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC093878.1-201ENST00000515630 432 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC011853.1-201ENST00000518911 454 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AP004609.2-201ENST00000532177 190 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 RPS3AP4-201ENST00000555161 764 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AL358334.3-201ENST00000557343 535 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC107075.1-201ENST00000613695 314 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 MRPL57P3-201ENST00000619218 176 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC104985.2-201ENST00000620598 500 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AL139254.2-202ENST00000641937 1156 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC245060.6-201ENST00000624350 8420 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 MYCBP2-201ENST00000357337 14736 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 API5P1-201ENST00000424316 1510 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ACTBP13-201ENST00000423971 3959 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 A2ML1-205ENST00000539547 3460 ntTSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 AC073429.2-201ENST00000569694 1444 ntBASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.81□□□□□ -1
ZC3H4Q9UPT8 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 MBD3L1-201ENST00000305625 748 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RNA5SP176-201ENST00000390956 110 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 IPPKP1-201ENST00000422501 768 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL139158.1-201ENST00000424719 340 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC126182.1-201ENST00000478134 357 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 MTATP6P22-201ENST00000507369 598 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC113347.3-201ENST00000509113 148 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 HIGD1AP18-201ENST00000520730 278 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 ISCA1P3-201ENST00000577104 373 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 ABBA01006766.1-201ENST00000584728 294 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AC090181.2-201ENST00000602975 672 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 WBP1LP12-201ENST00000604449 331 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LSM1P2-201ENST00000604911 322 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL139418.1-201ENST00000613613 177 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL596275.2-203ENST00000641951 371 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 ZNRD1ASP-211ENST00000376797 3270 ntTSL 2 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 AL355974.1-201ENST00000618896 1708 ntBASIC8.8□□□□□ -1
ZC3H4Q9UPT8 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
ZC3H4Q9UPT8 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms