Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 ST13P12-201ENST00000508958 1094 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 CR383658.1-201ENST00000514609 734 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AP003080.1-202ENST00000526526 915 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AC015726.1-202ENST00000602532 475 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 AC015982.1-201ENST00000608113 465 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 uc_338.29-201ENST00000615099 168 ntBASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
LRTM1Q9HBL6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 MIR1275-201ENST00000408770 80 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC130360.1-201ENST00000425489 1117 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 RPL12P24-201ENST00000474907 486 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 PFN1P6-201ENST00000476786 399 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC130365.2-201ENST00000525882 1201 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AP001357.1-201ENST00000586304 1053 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC006115.2-201ENST00000596823 202 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 WBP1LP12-201ENST00000604449 331 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AL080312.2-201ENST00000613001 630 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC020763.5-201ENST00000623298 430 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC000095.2-202ENST00000637415 154 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC008691.1-209ENST00000642094 814 ntBASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.73□□□□□ -1.49
LRTM1Q9HBL6 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 RNU1-134P-201ENST00000362935 165 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 MIR188-201ENST00000385034 86 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 RNA5SP198-201ENST00000410376 127 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 RN7SKP108-201ENST00000411367 328 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 AC099677.3-201ENST00000427081 395 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 FTLP8-201ENST00000446770 267 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 AC097359.1-201ENST00000447946 463 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 RSU1P1-201ENST00000453416 441 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 IGKV2-19-201ENST00000518132 283 ntBASIC5.72□□□□□ -1.49
LRTM1Q9HBL6 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms