Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 PSG10P-201ENST00000501199 1500 ntBASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 AC087392.3-202ENST00000358446 1754 ntBASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 SERPINA1-208ENST00000448921 3532 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.61□□□□□ -1.19
CNTNAP3Q9BZ76 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LARP1BP1-201ENST00000506036 1359 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 SNX20-203ENST00000423026 2156 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LIMCH1-216ENST00000512820 5071 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC007923.2-201ENST00000584218 1591 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 MAPK10-252ENST00000640970 2620 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 COPB2-201ENST00000333188 3360 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 MAPT-AS1-204ENST00000634876 3602 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 UBE2V2-207ENST00000523111 4373 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC023886.2-201ENST00000321285 411 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 Y_RNA.89-201ENST00000363031 102 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 RNU6-331P-201ENST00000384724 107 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL157402.1-201ENST00000429469 363 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LYPLA1P1-201ENST00000434514 622 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 RPEP4-201ENST00000437636 602 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 BX679664.2-201ENST00000439282 283 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL592437.1-201ENST00000443781 492 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 RAD23BP3-201ENST00000454157 1152 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 RN7SL761P-201ENST00000463259 278 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 TMED10P2-201ENST00000474255 612 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC116353.1-201ENST00000489727 316 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 RPL12P7-201ENST00000493832 494 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AF235103.2-201ENST00000525753 346 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 OR4A11P-201ENST00000529557 906 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC00640-201ENST00000554409 498 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC044860.3-201ENST00000559957 368 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC01582-201ENST00000560195 560 ntTSL 4 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 VN1R79P-201ENST00000593540 513 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC012488.1-201ENST00000611221 640 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC135050.6-202ENST00000613584 392 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 YWHAEP7-203ENST00000622054 312 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CYP4A22-203ENST00000371891 2535 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL022323.2-201ENST00000623239 3000 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC007126.1-201ENST00000508202 4781 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 PPARG-207ENST00000397015 1722 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 LRRC4C-202ENST00000527150 3085 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC023283.1-201ENST00000453491 4897 ntTSL 3 BASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 AC079298.1-201ENST00000625026 1619 ntBASIC7.6□□□□□ -1.19
CNTNAP3Q9BZ76 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
CNTNAP3Q9BZ76 AC009053.1-202ENST00000563377 2051 ntBASIC7.59□□□□□ -1.19
CNTNAP3Q9BZ76 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms