Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
DDX1Q92499 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
DDX1Q92499 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.13□□□□□ -1.27
DDX1Q92499 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
DDX1Q92499 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
DDX1Q92499 SNORD35A-201ENST00000363389 86 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 RNA5SP232-201ENST00000364144 119 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 Y_RNA.318-201ENST00000365131 97 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 UBBP1-201ENST00000392399 473 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 RNA5SP155-201ENST00000411154 129 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 TMA16P2-201ENST00000413187 601 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 BX664727.1-201ENST00000416024 466 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 PFN1P11-201ENST00000445829 389 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 NDUFA5P9-201ENST00000472609 340 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC020898.1-201ENST00000474167 787 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 RN7SL214P-201ENST00000487317 265 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 AP005902.2-201ENST00000518393 307 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC7.12□□□□□ -1.27
DDX1Q92499 AP003066.2-201ENST00000529375 555 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC005363.1-201ENST00000530779 351 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.12□□□□□ -1.27
DDX1Q92499 ACER3-213ENST00000533873 929 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL445383.1-201ENST00000554689 874 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 MIR378C-201ENST00000578683 81 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL953862.2-201ENST00000603089 820 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC124016.2-201ENST00000610058 665 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 MIR6862-1-201ENST00000613016 70 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 MIR6862-2-201ENST00000614755 70 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 AP002791.1-201ENST00000623291 381 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AP003497.2-201ENST00000624220 967 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 LGI1-209ENST00000627699 664 ntTSL 3 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL590396.4-201ENST00000636779 956 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 AC008691.1-209ENST00000642094 814 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 AC013488.1-201ENST00000526618 1838 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 AL078595.2-201ENST00000605309 1780 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.12□□□□□ -1.27
DDX1Q92499 ZNF812P-201ENST00000457674 1694 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 HSPD1P14-201ENST00000432666 1618 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
DDX1Q92499 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
DDX1Q92499 CDY5P-201ENST00000411487 1580 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 CDY9P-201ENST00000451397 1580 ntBASIC7.12□□□□□ -1.27
DDX1Q92499 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
DDX1Q92499 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
DDX1Q92499 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
DDX1Q92499 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms